| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26074 | 5:23,086,357-23,092,010 | + | C2H5g18842 | CX5g037055 | LOC_Os05g49130 | Os05g0566300 | - | Detail |
| C1H5g01748 | 5:23,092,183-23,097,377 | - | C2H5g13359 | CX5g041068 | LOC_Os05g49140 | Os05g0566400 | OsMAPK20-5 | Detail |
| C1H5g28958 | 5:23,106,657-23,108,414 | - | C2H5g12336 | CX5g037085 | LOC_Os05g49150 | Os05g0566500 | - | Detail |
| C1H5g22715 | 5:23,110,098-23,113,336 | - | C2H5g15036 | CX5g039816 | LOC_Os05g49160 | Os05g0566600 | - | Detail |
| C1H5g26245 | 5:23,115,168-23,117,111 | - | C2H5g13087 | CX5g038155 | LOC_Os05g49170 | Os05g0566800 | Oscor413-tm1 | Detail |
| C1H5g19913 | 5:23,128,869-23,136,429 | + | C2H5g22084 | CX5g040745 | LOC_Os05g49180 | Os05g0566900 | - | Detail |
| C1H5g06369 | 5:23,141,521-23,147,112 | + | C2H5g01258 | CX5g039784 | LOC_Os05g49200 | Os05g0567100 | - | Detail |
| C1H5g12413 | 5:23,148,605-23,151,142 | + | C2H5g08767 | CX5g037082 | LOC_Os05g49210 | Os05g0567200 | - | Detail |
| C1H5g25066 | 5:23,152,121-23,154,822 | - | C2H5g14170 | CX5g038906 | LOC_Os05g49220 | Os05g0567300 | WSL6 | Detail |
| C1H5g11758 | 5:23,164,201-23,168,746 | + | C2H5g01392 | CX5g040336 | LOC_Os05g49230 | Os05g0567400 | - | Detail |
| C1H5g12293 | 5:23,172,833-23,173,090 | + | C2H5g03563 | CX5g041097 | LOC_Os05g49240 | Os05g0567600 | - | Detail |
| C1H5g15392 | 5:23,175,046-23,175,930 | - | C2H5g24128 | CX5g040334 | LOC_Os05g49250 | Os05g0567500 | - | Detail |
| C1H5g01573 | 5:23,177,771-23,178,893 | - | C2H7g04084 | CX5g038777 | - | - | - | Detail |
| C1H5g07754 | 5:23,182,586-23,184,896 | + | C2H5g00173 | CX5g040684 | LOC_Os05g49260 | Os05g0567700 | OsERD3 | Detail |
| C1H5g17662 | 5:23,185,018-23,186,510 | + | C2H5g00173 | CX5g040684 | LOC_Os05g49260 | Os05g0579000 | OsERD5 | Detail |
| C1H5g00633 | 5:23,188,205-23,192,688 | + | C2H5g11854 | CX5g040065 | LOC_Os05g49270 | Os05g0567800 | OsERD4 | Detail |
| C1H5g22150 | 5:23,195,183-23,196,075 | - | C2H5g22796 | CX5g036717 | LOC_Os05g49280 | Os05g0567900 | - | Detail |
| C1H5g27105 | 5:23,202,566-23,204,655 | - | C2H5g07754 | CX5g037874 | LOC_Os05g49290 | Os05g0568000 | - | Detail |
| C1H5g00985 | 5:23,214,229-23,217,342 | + | C2H5g05526 | CX5g038165 | LOC_Os05g49300 | Os05g0568100 | - | Detail |
| C1H5g09631 | 5:23,220,174-23,222,479 | + | C2H5g04009 | CX5g036842 | LOC_Os05g49310 | Os05g0568200 | Os2R_MYB61 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |