| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g02326 | 4:20,896,673-20,899,990 | + | C2H4g22198 | CX4g032128 | LOC_Os04g40400 | Os04g0480100 | - | Detail |
| C1H4g02234 | 4:20,902,082-20,903,078 | - | C2H4g13593 | CX4g035970 | LOC_Os04g40410 | Os04g0480200 | OsNAR2.2 | Detail |
| C1H4g08203 | 4:20,904,190-20,908,641 | + | C2H4g10651 | CX4g031651 | LOC_Os04g40420 | Os04g0480300 | - | Detail |
| C1H4g03377 | 4:20,909,487-20,912,056 | + | C2H4g01241 | CX4g032839 | LOC_Os04g40430 | Os04g0480400 | - | Detail |
| C1H4g22344 | 4:20,912,878-20,916,215 | + | C2H4g02108 | CX4g034579 | LOC_Os04g40440 | Os04g0480500 | - | Detail |
| C1H4g27047 | 4:20,918,563-20,921,371 | - | C2H4g07141 | CX4g035688 | LOC_Os04g40460 | Os04g0480700 | - | Detail |
| C1H4g02669 | 4:20,924,852-20,926,721 | - | C2H4g07141 | CX4g035688 | LOC_Os04g40470 | Os04g0480650 | - | Detail |
| C1H4g02386 | 4:20,928,495-20,928,960 | + | - | - | - | - | - | Detail |
| C1H4g27434 | 4:20,928,997-20,929,529 | + | C2H4g24183 | - | - | - | - | Detail |
| C1H4g22198 | 4:20,929,658-20,932,966 | + | C2H4g27287 | CX4g035420 | LOC_Os04g40490 | Os04g0480900 | - | Detail |
| C1H4g12967 | 4:20,934,834-20,937,355 | + | C2H4g06758 | CX4g035420 | LOC_Os04g40500 | Os04g0481000 | - | Detail |
| C1H4g27122 | 4:20,944,626-20,945,225 | + | C2H4g19832 | CX4g035145 | LOC_Os04g40510 | Os04g0481200 | - | Detail |
| C1H4g09900 | 4:20,945,245-20,945,463 | + | C2H4g19832 | CX4g035145 | LOC_Os04g40510 | Os04g0481200 | - | Detail |
| C1H4g04059 | 4:20,945,849-20,946,997 | + | C2H4g19832 | CX4g035145 | LOC_Os04g40510 | Os04g0481200 | - | Detail |
| C1H4g30807 | 4:20,947,263-20,951,458 | - | C2H4g27069 | CX4g033422 | LOC_Os04g40520 | Os04g0481100 | - | Detail |
| C1H4g28363 | 4:20,952,591-20,953,780 | + | C2H4g01816 | CX4g032691 | LOC_Os04g40530 | Os04g0481300 | - | Detail |
| C1H4g26467 | 4:20,954,257-20,956,070 | - | C2H4g14800 | CX4g033470 | LOC_Os04g40540 | Os04g0481400 | PIMT2, OsPIMT2 | Detail |
| C1H4g30891 | 4:20,957,077-20,958,765 | - | C2H4g02100 | CX4g036535 | LOC_Os04g40550 | Os04g0481500 | - | Detail |
| C1H4g04703 | 4:20,975,783-20,980,278 | + | C2H4g05692 | CX4g036548 | LOC_Os04g40570 | Os04g0481700 | - | Detail |
| C1H4g19577 | 4:20,985,447-20,986,827 | - | C2H4g06893 | CX4g033202 | LOC_Os04g40600 | Os04g0482000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |