| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g11762 | 2:656,562-659,068 | - | C2H2g21548 | CX2g024182 | LOC_Os02g02340 | Os02g0114400 | - | Detail |
| C1H2g29199 | 2:661,799-662,994 | - | C2H2g04111 | CX2g021876 | LOC_Os02g02350 | Os02g0114600 | - | Detail |
| C1H2g10090 | 2:666,198-669,177 | + | C2H2g07298 | CX2g021156 | LOC_Os02g02360 | Os02g0114700 | - | Detail |
| C1H2g19065 | 2:669,813-671,273 | - | C2H2g02552 | CX2g020281 | LOC_Os02g02370 | Os02g0114800 | Os2R_MYB21 | Detail |
| C1H2g14513 | 2:687,514-688,196 | - | C2H2g18097 | CX2g022130 | - | - | - | Detail |
| C1H2g31636 | 2:689,622-695,166 | + | C2H2g11269 | CX2g023614 | LOC_Os02g02390 | Os02g0115600 | - | Detail |
| C1H2g15167 | 2:695,680-698,749 | - | C2H2g21905 | CX2g022215 | LOC_Os02g02400 | Os02g0115700 | - | Detail |
| C1H2g18712 | 2:707,960-711,879 | - | C2H2g22925 | CX2g022763 | LOC_Os02g02410 | Os02g0115900 | - | Detail |
| C1H2g23488 | 2:720,215-726,027 | - | C2H2g22481 | CX2g018904 | LOC_Os02g02424 | Os02g0116100 | - | Detail |
| C1H2g08310 | 2:726,185-731,100 | + | C2H2g02693 | CX2g024684 | LOC_Os02g02450 | Os02g0116300 | - | Detail |
| C1H2g18413 | 2:732,401-735,104 | - | C2H2g25370 | CX2g022303 | LOC_Os02g02460 | Os02g0116400 | - | Detail |
| C1H2g02239 | 2:736,715-740,195 | + | C2H2g02725 | CX2g023722 | LOC_Os02g02470 | Os02g0116500 | - | Detail |
| C1H2g18401 | 2:741,032-743,102 | - | C2H2g29037 | CX2g022400 | LOC_Os02g02480 | Os02g0116600 | - | Detail |
| C1H2g19763 | 2:758,064-761,225 | + | C2H2g16051 | CX2g018865 | LOC_Os02g02490 | Os02g0116700 | - | Detail |
| C1H2g26296 | 2:763,600-767,567 | + | C2H2g22344 | CX2g022188 | LOC_Os02g02500 | Os02g0116800 | - | Detail |
| C1H2g25904 | 2:768,469-769,339 | - | C2H2g30237 | CX2g022274 | LOC_Os02g02510 | Os02g0116900 | - | Detail |
| C1H2g09113 | 2:769,474-773,615 | + | C2H2g06807 | CX2g020897 | LOC_Os02g02520 | Os02g0117100 | - | Detail |
| C1H2g08549 | 2:774,800-777,841 | + | C2H2g05457 | CX2g019978 | LOC_Os02g02524 | Os02g0117200 | - | Detail |
| C1H2g08561 | 2:778,963-783,783 | + | C2H2g17690 | CX2g019978 | LOC_Os02g02530 | Os02g0117400 | - | Detail |
| C1H2g26952 | 2:790,932-796,120 | + | C2H2g19794 | CX2g018844 | LOC_Os02g02540 | Os02g0117500 | OsGLR3.2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |