| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g23016 | 1:32,302,638-32,305,100 | + | C2H1g03584 | CX1g005615 | LOC_Os01g62840 | Os01g0847200 | - | Detail |
| C1H1g02630 | 1:32,306,178-32,311,042 | - | C2H1g03289 | CX1g001706 | LOC_Os01g62850 | Os01g0847300 | - | Detail |
| C1H1g31870 | 1:32,314,685-32,318,170 | + | C2H1g07830 | CX1g005066 | LOC_Os01g62860 | Os01g0847600 | ARK1, OsAKR1 | Detail |
| C1H1g07686 | 1:32,320,457-32,323,969 | + | C2H1g21631 | CX1g005497 | LOC_Os01g62870 | Os01g0847700 | AKR2, AKR4C14, OsAKR2 | Detail |
| C1H1g22712 | 1:32,325,862-32,327,734 | + | C2H1g08819 | CX1g005066 | LOC_Os01g62880 | Os01g0847800 | AKR3, OsAKR3 | Detail |
| C1H1g14644 | 1:32,328,490-32,330,454 | - | C2H1g15059 | CX1g003081 | LOC_Os01g62890 | Os01g0847900 | - | Detail |
| C1H1g16705 | 1:32,341,275-32,348,107 | + | C2H1g11514 | CX1g000565 | LOC_Os01g62900 | Os01g0848200 | - | Detail |
| C1H1g11009 | 1:32,348,632-32,350,614 | - | C2H1g01586 | CX1g005616 | LOC_Os01g62910 | Os01g0848300 | - | Detail |
| C1H1g22605 | 1:32,353,391-32,353,984 | + | C2H8g05136 | CX1g000108 | - | - | - | Detail |
| C1H1g00348 | 1:32,354,777-32,359,699 | - | C2H1g22585 | CX1g003256 | LOC_Os01g62920 | Os01g0848400 | RIL1, qSH1, qsh1, qSH-1 | Detail |
| C1H1g22802 | 1:32,378,322-32,380,677 | - | C2H1g19053 | CX1g002502 | LOC_Os01g62950 | Os01g0848700 | - | Detail |
| C1H1g07745 | 1:32,389,656-32,391,298 | + | C2H1g10907 | CX1g003078 | LOC_Os01g62970 | Os01g0848900 | - | Detail |
| C1H1g24931 | 1:32,393,100-32,393,716 | - | - | CX1g001574 | LOC_Os01g62980 | Os01g0849000 | - | Detail |
| C1H1g21425 | 1:32,394,575-32,398,687 | - | C2H1g16292 | CX1g001453 | LOC_Os01g62990 | Os01g0849100 | OsRacGEF1, RacGEF1 | Detail |
| C1H1g01663 | 1:32,404,545-32,404,751 | + | C2H1g08637 | CX1g005776 | LOC_Os01g69890 | Os01g0849500 | - | Detail |
| C1H1g13733 | 1:32,405,570-32,406,470 | - | C2H1g12668 | CX1g004136 | LOC_Os01g63010 | Os01g0849600 | - | Detail |
| C1H1g00887 | 1:32,428,783-32,430,725 | + | C2H1g11763 | CX1g001895 | LOC_Os01g63050 | Os01g0850000 | - | Detail |
| C1H1g20419 | 1:32,439,603-32,443,836 | + | C2H1g25333 | CX1g001763 | LOC_Os01g63060 | Os01g0850100 | OsIPCS1 | Detail |
| C1H1g28891 | 1:32,445,793-32,449,233 | - | C2H1g09490 | CX1g000954 | LOC_Os01g63150 | Os01g0850200 | - | Detail |
| C1H1g14257 | 1:32,450,402-32,451,035 | + | - | CX1g004176 | LOC_Os11g42050 | Os01g0509800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |