| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29051 | 9:16,101,891-16,104,286 | - | C2H9g09442 | CX9g055341 | LOC_Os09g32610 | Os09g0502900 | - | Detail |
| C1H9g27895 | 9:16,108,452-16,109,786 | + | C2H9g03067 | CX9g055636 | LOC_Os09g32620 | Os09g0503000 | - | Detail |
| C1H9g22567 | 9:16,112,093-16,114,582 | + | C2H9g26652 | CX9g058014 | LOC_Os09g32640 | Os09g0503100 | - | Detail |
| C1H9g12902 | 9:16,115,459-16,120,530 | + | C2H9g20718 | CX9g055869 | LOC_Os09g32650 | Os09g0503400 | - | Detail |
| C1H9g11041 | 9:16,122,452-16,125,229 | - | C2H9g18609 | CX9g055215 | LOC_Os09g32660 | Os09g0503700 | - | Detail |
| C1H9g11647 | 9:16,133,443-16,136,491 | - | C2H9g25649 | CX9g055215 | LOC_Os09g32660 | Os09g0503700 | - | Detail |
| C1H9g05238 | 9:16,142,022-16,143,509 | - | C2H9g28414 | CX9g055153 | LOC_Os09g32670 | Os09g0504000 | - | Detail |
| C1H9g15461 | 9:16,154,229-16,158,070 | + | C2H9g28585 | CX9g056666 | LOC_Os09g32680 | Os09g0504400 | OsCycC | Detail |
| C1H9g24869 | 9:16,159,220-16,161,432 | - | C2H9g18502 | CX9g055615 | LOC_Os09g32690 | Os09g0504700 | - | Detail |
| C1H9g01645 | 9:16,162,548-16,164,608 | + | C2H9g07035 | CX9g055065 | LOC_Os09g32700 | Os09g0504800 | - | Detail |
| C1H9g24207 | 9:16,165,455-16,168,142 | - | C2H9g25198 | CX9g057729 | LOC_Os09g32710 | Os09g0504900 | - | Detail |
| C1H9g05583 | 9:16,172,355-16,173,002 | - | C2H8g08683 | CX9g056602 | LOC_Os09g32730 | Os09g0505000 | - | Detail |
| C1H9g18162 | 9:16,174,906-16,180,480 | - | C2H9g10527 | CX9g056102 | LOC_Os09g32740 | Os09g0505100 | OsLMP1 | Detail |
| C1H9g22641 | 9:16,188,224-16,192,611 | + | C2H9g09607 | CX9g056649 | LOC_Os09g32750 | Os09g0505200 | - | Detail |
| C1H9g03482 | 9:16,192,590-16,196,611 | - | C2H9g21366 | CX9g055713 | LOC_Os09g32760 | Os09g0505300 | - | Detail |
| C1H9g24687 | 9:16,200,507-16,203,120 | - | C2H9g12699 | CX9g056695 | LOC_Os09g32770 | Os09g0505400 | - | Detail |
| C1H9g26041 | 9:16,206,688-16,209,872 | + | C2H9g11822 | CX9g056682 | LOC_Os09g32800 | Os09g0505600 | - | Detail |
| C1H9g06786 | 9:16,211,141-16,215,158 | + | - | - | - | - | - | Detail |
| C1H9g21392 | 9:16,216,148-16,221,718 | + | C2H9g24671 | CX9g056458 | LOC_Os09g32820 | Os09g0505800 | - | Detail |
| C1H9g14148 | 9:16,223,441-16,226,949 | + | C2H9g08120 | CX9g057123 | LOC_Os09g32830 | Os09g0505900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |