| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15675 | 2:16,890,787-16,892,698 | - | - | - | - | - | - | Detail |
| C2H2g02091 | 2:16,892,872-16,895,533 | - | C1H2g07508 | CX2g021124 | LOC_Os02g29230 | Os02g0494700 | - | Detail |
| C2H2g21430 | 2:16,919,835-16,922,428 | + | C1H2g15213 | CX2g024025 | LOC_Os02g29320 | Os02g0495900 | - | Detail |
| C2H2g28939 | 2:16,924,944-16,928,003 | + | C1H2g17640 | CX2g021879 | LOC_Os02g29340 | Os02g0496100 | - | Detail |
| C2H2g27507 | 2:16,946,329-16,955,194 | + | C1H2g31348 | CX2g019857 | LOC_Os02g29380 | Os02g0496500 | - | Detail |
| C2H2g20239 | 2:16,984,045-16,984,358 | - | C1H2g06102 | CX2g020144 | - | - | - | Detail |
| C2H2g27889 | 2:16,994,170-17,010,546 | - | C1H2g19951 | CX2g021979 | LOC_Os02g29464 | Os02g0497500 | OsRad50 | Detail |
| C2H2g10889 | 2:17,013,171-17,018,255 | - | C1H2g29599 | CX2g022046 | LOC_Os02g29480 | Os02g0497700 | - | Detail |
| C2H2g19997 | 2:17,026,325-17,030,621 | + | C1H2g31439 | CX2g024654 | LOC_Os02g29510 | Os02g0498300 | - | Detail |
| C2H2g11686 | 2:17,041,871-17,045,424 | - | C1H2g08348 | CX2g019728 | LOC_Os02g29530 | Os02g0498700 | - | Detail |
| C2H2g16859 | 2:17,060,273-17,063,857 | + | C1H2g11979 | CX2g023292 | LOC_Os02g29550 | Os02g0499000 | - | Detail |
| C2H2g10739 | 2:17,085,035-17,085,939 | - | C1H2g02483 | CX2g021045 | LOC_Os02g29600 | Os02g0621300 | OsCER1 | Detail |
| C2H2g26269 | 2:17,086,141-17,088,636 | - | C1H2g00197 | CX2g021045 | - | Os02g0621300 | OsCER1 | Detail |
| C2H2g27309 | 2:17,101,343-17,103,192 | - | C1H2g26097 | CX2g019497 | LOC_Os02g29720 | Os02g0502300 | - | Detail |
| C2H2g04190 | 2:17,125,913-17,130,357 | + | C1H2g27752 | CX2g019809 | LOC_Os02g29890 | Os02g0502500 | - | Detail |
| C2H2g08548 | 2:17,137,083-17,140,564 | + | C1H2g04058 | CX2g022415 | LOC_Os02g29960 | Os02g0503100 | - | Detail |
| C2H2g19523 | 2:17,157,639-17,161,072 | + | C1H2g17175 | CX2g023097 | LOC_Os02g29980 | Os02g0503350 | - | Detail |
| C2H2g29579 | 2:17,164,301-17,165,644 | + | C1H2g03858 | CX2g019002 | LOC_Os02g30050 | Os02g0503400 | - | Detail |
| C2H2g17083 | 2:17,166,312-17,170,775 | - | C1H2g13531 | CX2g022682 | LOC_Os02g30060 | Os02g0503500 | - | Detail |
| C2H2g19670 | 2:17,206,716-17,207,805 | + | C1H2g13731 | CX2g023930 | LOC_Os02g30080 | Os02g0503700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057792 | 9:16,036,579-16,037,658 | - | C1H9g12952 | C2H9g03838 | LOC_Os09g31050 | Os09g0483600 | - | Detail |
| CX9g056123 | 9:16,046,643-16,047,101 | + | C1H9g22239 | - | - | - | - | Detail |
| CX9g055724 | 9:16,049,742-16,055,206 | - | C1H9g10463 | C2H9g25938 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| CX9g056973 | 9:16,059,980-16,060,357 | - | C1H9g16977 | C2H9g03541 | LOC_Os09g36280 | Os09g0533200 | - | Detail |
| CX9g056981 | 9:16,063,527-16,063,934 | + | C1H9g25991 | - | LOC_Os09g31100 | - | - | Detail |
| CX9g056137 | 9:16,070,540-16,072,394 | + | C1H9g25716 | C2H9g09529 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| CX9g055844 | 9:16,079,330-16,081,904 | + | C1H9g21552 | C2H9g06729 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| CX9g056353 | 9:16,083,773-16,084,018 | + | - | - | LOC_Os07g22498 | Os09g0485201 | - | Detail |
| CX9g057232 | 9:16,104,013-16,108,689 | + | C1H9g28280 | C2H9g05554 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| CX9g057421 | 9:16,117,191-16,118,095 | + | C1H9g16686 | C2H9g12865 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| CX9g056446 | 9:16,118,631-16,120,150 | - | C1H9g09571 | C2H9g08271 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| CX9g057305 | 9:16,120,510-16,121,148 | - | - | C2H9g29447 | - | Os09g0485950 | - | Detail |
| CX9g058060 | 9:16,125,911-16,126,405 | + | C1H9g10100 | C2H9g10052 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| CX9g055617 | 9:16,128,534-16,129,086 | + | - | - | - | - | - | Detail |
| CX9g057423 | 9:16,129,497-16,129,730 | - | C1H3g22613 | C2H3g04799 | - | Os10g0433200 | - | Detail |
| CX9g056228 | 9:16,136,872-16,138,345 | + | C1H9g04466 | C2H9g09908 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| CX9g057251 | 9:16,146,266-16,149,323 | - | C1H9g26143 | C2H9g06324 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| CX9g056189 | 9:16,151,178-16,151,438 | - | - | - | - | - | - | Detail |
| CX9g055951 | 9:16,159,194-16,159,547 | - | C1H9g26058 | C2H8g28041 | LOC_Os09g31260 | Os09g0487500 | - | Detail |
| CX9g058148 | 9:16,160,661-16,162,673 | - | C1H9g29280 | C2H9g10558 | LOC_Os09g31270 | Os09g0487600 | - | Detail |