| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19079 | 3:31,709,742-31,710,784 | - | C2H3g05006 | CX3g025408 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| C1H3g19228 | 3:31,745,476-31,759,310 | - | C2H3g19593 | CX3g028422 | - | Os03g0812000 | - | Detail |
| C1H3g24075 | 3:31,765,163-31,767,619 | + | C2H3g16505 | CX3g025855 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| C1H3g29140 | 3:31,782,306-31,782,722 | - | - | - | - | - | - | Detail |
| C1H3g23671 | 3:31,787,654-31,790,831 | - | C2H3g09561 | CX3g025448 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| C1H3g23594 | 3:31,805,054-31,806,130 | + | C2H3g11227 | CX3g030353 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| C1H3g00328 | 3:31,807,003-31,813,191 | - | C2H3g24873 | CX3g029581 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| C1H3g20553 | 3:31,814,250-31,814,633 | - | C2H3g26221 | - | - | Os03g0815332 | - | Detail |
| C1H3g20794 | 3:31,814,302-31,815,644 | + | C2H3g04086 | CX3g025237 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| C1H3g22427 | 3:31,822,439-31,826,090 | + | C2H3g14885 | CX3g029363 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| C1H3g09437 | 3:31,828,607-31,829,353 | - | C2H3g05216 | CX3g030003 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| C1H3g16381 | 3:31,831,314-31,834,037 | - | C2H3g17896 | CX3g030342 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| C1H3g12909 | 3:31,837,074-31,838,284 | - | C2H3g03956 | CX3g025316 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| C1H3g09858 | 3:31,838,927-31,842,804 | - | C2H3g08821 | CX3g030622 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| C1H3g10675 | 3:31,849,495-31,851,106 | + | C2H3g29247 | - | - | Os03g0816200 | - | Detail |
| C1H3g28154 | 3:31,854,366-31,859,983 | - | C2H3g28963 | CX3g027879 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| C1H3g21278 | 3:31,861,583-31,866,220 | - | C2H3g10484 | CX3g027734 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| C1H3g16235 | 3:31,869,959-31,875,204 | + | C2H3g29652 | CX3g029573 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| C1H3g01566 | 3:31,876,781-31,877,895 | - | C2H3g04502 | CX3g031210 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| C1H3g01354 | 3:31,879,282-31,880,081 | - | C2H3g09881 | CX3g029902 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057792 | 9:16,036,579-16,037,658 | - | C1H9g12952 | C2H9g03838 | LOC_Os09g31050 | Os09g0483600 | - | Detail |
| CX9g056123 | 9:16,046,643-16,047,101 | + | C1H9g22239 | - | - | - | - | Detail |
| CX9g055724 | 9:16,049,742-16,055,206 | - | C1H9g10463 | C2H9g25938 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| CX9g056973 | 9:16,059,980-16,060,357 | - | C1H9g16977 | C2H9g03541 | LOC_Os09g36280 | Os09g0533200 | - | Detail |
| CX9g056981 | 9:16,063,527-16,063,934 | + | C1H9g25991 | - | LOC_Os09g31100 | - | - | Detail |
| CX9g056137 | 9:16,070,540-16,072,394 | + | C1H9g25716 | C2H9g09529 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| CX9g055844 | 9:16,079,330-16,081,904 | + | C1H9g21552 | C2H9g06729 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| CX9g056353 | 9:16,083,773-16,084,018 | + | - | - | LOC_Os07g22498 | Os09g0485201 | - | Detail |
| CX9g057232 | 9:16,104,013-16,108,689 | + | C1H9g28280 | C2H9g05554 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| CX9g057421 | 9:16,117,191-16,118,095 | + | C1H9g16686 | C2H9g12865 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| CX9g056446 | 9:16,118,631-16,120,150 | - | C1H9g09571 | C2H9g08271 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| CX9g057305 | 9:16,120,510-16,121,148 | - | - | C2H9g29447 | - | Os09g0485950 | - | Detail |
| CX9g058060 | 9:16,125,911-16,126,405 | + | C1H9g10100 | C2H9g10052 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| CX9g055617 | 9:16,128,534-16,129,086 | + | - | - | - | - | - | Detail |
| CX9g057423 | 9:16,129,497-16,129,730 | - | C1H3g22613 | C2H3g04799 | - | Os10g0433200 | - | Detail |
| CX9g056228 | 9:16,136,872-16,138,345 | + | C1H9g04466 | C2H9g09908 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| CX9g057251 | 9:16,146,266-16,149,323 | - | C1H9g26143 | C2H9g06324 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| CX9g056189 | 9:16,151,178-16,151,438 | - | - | - | - | - | - | Detail |
| CX9g055951 | 9:16,159,194-16,159,547 | - | C1H9g26058 | C2H8g28041 | LOC_Os09g31260 | Os09g0487500 | - | Detail |
| CX9g058148 | 9:16,160,661-16,162,673 | - | C1H9g29280 | C2H9g10558 | LOC_Os09g31270 | Os09g0487600 | - | Detail |