| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g07424 | 9:19,218,434-19,222,530 | + | C1H9g13374 | CX9g057785 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| C2H9g05946 | 9:19,224,305-19,225,510 | + | C1H9g26902 | CX9g055093 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| C2H9g19055 | 9:19,229,128-19,230,339 | + | C1H9g23958 | CX9g057620 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| C2H9g15395 | 9:19,231,647-19,237,669 | - | C1H9g25655 | CX9g056260 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| C2H9g06176 | 9:19,245,063-19,247,290 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g22038 | 9:19,251,638-19,252,552 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g09064 | 9:19,256,964-19,263,700 | - | C1H9g21987 | CX9g056096 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| C2H9g08732 | 9:19,265,273-19,266,640 | - | C1H9g31128 | CX9g056096 | LOC_Os09g39350 | Os09g0567000 | - | Detail |
| C2H9g17992 | 9:19,273,423-19,277,358 | + | C1H9g04890 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C2H9g25680 | 9:19,277,859-19,280,562 | + | C1H9g13266 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C2H9g00653 | 9:19,282,863-19,285,337 | + | C1H9g16090 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C2H9g10548 | 9:19,289,359-19,295,560 | + | C1H9g25909 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C2H9g15634 | 9:19,296,740-19,301,777 | + | C1H9g01897 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C2H9g07527 | 9:19,301,792-19,305,375 | - | C1H9g27590 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C2H9g28844 | 9:19,309,307-19,311,969 | - | C1H9g04610 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C2H9g14034 | 9:19,314,286-19,318,425 | + | C1H9g06631 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C2H9g07303 | 9:19,319,765-19,321,171 | + | C1H9g18800 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C2H9g14146 | 9:19,321,995-19,323,316 | - | C1H9g25533 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C2H9g28333 | 9:19,333,286-19,334,722 | - | C1H9g27100 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C2H9g03364 | 9:19,334,994-19,336,916 | + | C1H9g30656 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004253 | 1:30,508,014-30,510,281 | + | C1H1g29312 | C2H1g17898 | LOC_Os01g59360 | Os01g0808400 | OsCPK2 | Detail |
| CX1g001206 | 1:30,548,242-30,548,421 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g000100 | 1:30,548,718-30,552,454 | + | C1H1g29168 | C2H1g23554 | LOC_Os01g59440 | Os01g0809300 | LRR1, OsLRR1 | Detail |
| CX1g001964 | 1:30,555,171-30,558,927 | + | C1H1g14629 | C2H1g09879 | LOC_Os01g59470 | - | - | Detail |
| CX1g004356 | 1:30,568,029-30,570,470 | + | C1H1g08327 | C2H1g27115 | LOC_Os01g59490 | Os01g0809900 | - | Detail |
| CX1g002424 | 1:30,571,666-30,574,096 | - | C1H1g01557 | C2H1g13365 | LOC_Os01g59500 | Os01g0810000 | - | Detail |
| CX1g006451 | 1:30,575,014-30,578,574 | - | C1H1g20345 | C2H1g08587 | LOC_Os01g59510 | Os01g0810100 | - | Detail |
| CX1g000157 | 1:30,578,924-30,581,354 | + | C1H1g31825 | C2H1g08159 | LOC_Os01g59520 | Os01g0810200 | - | Detail |
| CX1g004546 | 1:30,582,808-30,584,862 | + | C1H1g22865 | C2H1g30156 | LOC_Os01g59530 | Os01g0810300 | OsCaM61 | Detail |
| CX1g001838 | 1:30,586,287-30,601,942 | - | C1H1g13792 | C2H1g22778 | LOC_Os01g59550 | Os01g0810600 | - | Detail |
| CX1g002986 | 1:30,648,251-30,651,877 | + | C1H1g20172 | C2H1g30646 | LOC_Os01g59600 | Os01g0811100 | - | Detail |
| CX1g002336 | 1:30,658,422-30,658,583 | - | - | - | - | - | - | Detail |
| CX1g000845 | 1:30,659,205-30,661,415 | + | C1H1g16149 | C2H1g10766 | LOC_Os01g59620 | Os01g0811300 | OsSUVH7 | Detail |
| CX1g002055 | 1:30,663,263-30,667,268 | - | C1H1g17620 | C2H1g16591 | LOC_Os01g59630 | Os01g0811400 | - | Detail |
| CX1g000306 | 1:30,668,021-30,670,357 | - | C1H1g10539 | C2H1g20004 | LOC_Os01g59640 | Os01g0816100 | OsNAC4 | Detail |
| CX1g005819 | 1:30,684,969-30,687,967 | + | C1H1g07416 | C2H1g07229 | LOC_Os01g59660 | Os01g0812000 | - | Detail |
| CX1g000825 | 1:30,691,718-30,696,097 | + | C1H1g26167 | C2H1g19546 | LOC_Os01g59670 | Os01g0812050 | - | Detail |
| CX1g002345 | 1:30,698,773-30,699,699 | + | C1H1g24822 | C2H1g07662 | LOC_Os01g59680 | Os01g0812100 | - | Detail |
| CX1g004329 | 1:30,700,618-30,701,305 | - | C1H1g01233 | C2H5g22059 | LOC_Os11g42360 | - | - | Detail |
| CX1g002899 | 1:30,707,180-30,708,241 | + | C1H1g23884 | C2H1g22698 | LOC_Os01g59690 | Os01g0812200 | - | Detail |