| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004253 | 1:30,508,014-30,510,281 | + | C1H1g29312 | C2H1g17898 | LOC_Os01g59360 | Os01g0808400 | OsCPK2 | Detail |
| CX1g001206 | 1:30,548,242-30,548,421 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g000100 | 1:30,548,718-30,552,454 | + | C1H1g29168 | C2H1g23554 | LOC_Os01g59440 | Os01g0809300 | LRR1, OsLRR1 | Detail |
| CX1g001964 | 1:30,555,171-30,558,927 | + | C1H1g14629 | C2H1g09879 | LOC_Os01g59470 | - | - | Detail |
| CX1g004356 | 1:30,568,029-30,570,470 | + | C1H1g08327 | C2H1g27115 | LOC_Os01g59490 | Os01g0809900 | - | Detail |
| CX1g002424 | 1:30,571,666-30,574,096 | - | C1H1g01557 | C2H1g13365 | LOC_Os01g59500 | Os01g0810000 | - | Detail |
| CX1g006451 | 1:30,575,014-30,578,574 | - | C1H1g20345 | C2H1g08587 | LOC_Os01g59510 | Os01g0810100 | - | Detail |
| CX1g000157 | 1:30,578,924-30,581,354 | + | C1H1g31825 | C2H1g08159 | LOC_Os01g59520 | Os01g0810200 | - | Detail |
| CX1g004546 | 1:30,582,808-30,584,862 | + | C1H1g22865 | C2H1g30156 | LOC_Os01g59530 | Os01g0810300 | OsCaM61 | Detail |
| CX1g001838 | 1:30,586,287-30,601,942 | - | C1H1g13792 | C2H1g22778 | LOC_Os01g59550 | Os01g0810600 | - | Detail |
| CX1g002986 | 1:30,648,251-30,651,877 | + | C1H1g20172 | C2H1g30646 | LOC_Os01g59600 | Os01g0811100 | - | Detail |
| CX1g002336 | 1:30,658,422-30,658,583 | - | - | - | - | - | - | Detail |
| CX1g000845 | 1:30,659,205-30,661,415 | + | C1H1g16149 | C2H1g10766 | LOC_Os01g59620 | Os01g0811300 | OsSUVH7 | Detail |
| CX1g002055 | 1:30,663,263-30,667,268 | - | C1H1g17620 | C2H1g16591 | LOC_Os01g59630 | Os01g0811400 | - | Detail |
| CX1g000306 | 1:30,668,021-30,670,357 | - | C1H1g10539 | C2H1g20004 | LOC_Os01g59640 | Os01g0816100 | OsNAC4 | Detail |
| CX1g005819 | 1:30,684,969-30,687,967 | + | C1H1g07416 | C2H1g07229 | LOC_Os01g59660 | Os01g0812000 | - | Detail |
| CX1g000825 | 1:30,691,718-30,696,097 | + | C1H1g26167 | C2H1g19546 | LOC_Os01g59670 | Os01g0812050 | - | Detail |
| CX1g002345 | 1:30,698,773-30,699,699 | + | C1H1g24822 | C2H1g07662 | LOC_Os01g59680 | Os01g0812100 | - | Detail |
| CX1g004329 | 1:30,700,618-30,701,305 | - | C1H1g01233 | C2H5g22059 | LOC_Os11g42360 | - | - | Detail |
| CX1g002899 | 1:30,707,180-30,708,241 | + | C1H1g23884 | C2H1g22698 | LOC_Os01g59690 | Os01g0812200 | - | Detail |