| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g10503 | 3:31,018,725-31,023,261 | + | C2H3g08474 | CX3g030026 | LOC_Os03g58330 | Os03g0797600 | - | Detail |
| C1H3g24967 | 3:31,025,311-31,029,594 | + | C2H3g12283 | CX3g028967 | LOC_Os03g58340 | Os03g0797700 | - | Detail |
| C1H3g07209 | 3:31,031,964-31,032,849 | - | C2H3g10910 | CX3g030491 | LOC_Os03g58350 | Os03g0797800 | - | Detail |
| C1H3g27032 | 3:31,046,482-31,050,991 | + | C2H3g14567 | CX3g026604 | LOC_Os03g58390 | Os03g0798200 | OsSIRP2 | Detail |
| C1H3g07394 | 3:31,055,146-31,056,028 | + | C2H3g12023 | CX3g026933 | - | Os03g0798300 | MET1A, OsMET1a | Detail |
| C1H3g15034 | 3:31,056,280-31,060,214 | + | C2H3g12023 | CX3g026933 | LOC_Os03g58400 | Os03g0798300 | MET1A, OsMET1a | Detail |
| C1H3g27027 | 3:31,067,455-31,068,450 | + | C2H3g14987 | CX3g027494 | LOC_Os03g58420 | Os03g0798500 | WRKY6, OsWRKY6 | Detail |
| C1H3g31831 | 3:31,071,682-31,073,953 | - | C2H3g13256 | CX3g029355 | LOC_Os03g58430 | Os03g0798600 | - | Detail |
| C1H3g10227 | 3:31,093,756-31,095,224 | + | C2H3g19553 | CX3g027700 | LOC_Os03g58470 | Os03g0799000 | - | Detail |
| C1H3g22883 | 3:31,102,124-31,105,137 | + | C2H3g00021 | CX3g027936 | LOC_Os03g58480 | Os03g0799100 | - | Detail |
| C1H3g05533 | 3:31,105,859-31,109,624 | + | C2H3g17340 | CX3g029501 | LOC_Os03g58490 | Os03g0799200 | - | Detail |
| C1H3g27400 | 3:31,119,228-31,119,981 | + | C2H3g24790 | CX3g028436 | LOC_Os03g58520 | Os03g0799500 | - | Detail |
| C1H3g03166 | 3:31,121,390-31,126,631 | + | C2H3g17610 | CX3g026773 | LOC_Os03g58530 | Os03g0799600 | - | Detail |
| C1H3g23240 | 3:31,127,252-31,131,235 | + | C2H3g03002 | CX3g031023 | LOC_Os03g58540 | Os03g0799700 | TSV3, OsObgC2 | Detail |
| C1H3g05452 | 3:31,139,065-31,145,672 | + | C2H3g02702 | CX3g028846 | LOC_Os03g58570 | Os03g0799900 | - | Detail |
| C1H3g28576 | 3:31,154,811-31,161,197 | + | C2H3g08530 | CX3g028891 | LOC_Os03g58590 | Os03g0800100 | - | Detail |
| C1H3g06142 | 3:31,161,949-31,170,862 | - | C2H3g26883 | CX3g030682 | LOC_Os03g58600 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| C1H3g31832 | 3:31,177,115-31,182,312 | - | C2H3g21138 | CX3g025373 | LOC_Os03g58610 | Os03g0800400 | - | Detail |
| C1H3g31423 | 3:31,183,056-31,184,866 | - | C2H3g18555 | CX3g026714 | LOC_Os03g58630 | Os03g0800700 | - | Detail |
| C1H3g10764 | 3:31,185,470-31,194,088 | - | C2H3g28838 | CX3g026264 | LOC_Os03g58640 | Os03g0800800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056572 | 9:15,402,938-15,406,504 | + | C1H9g07158 | C2H9g15645 | LOC_Os09g29430 | Os09g0470000 | - | Detail |
| CX9g057773 | 9:15,419,792-15,420,859 | + | C1H9g24171 | C2H9g00352 | LOC_Os09g29460 | Os09g0470500 | Oshox4 | Detail |
| CX9g057955 | 9:15,434,305-15,439,319 | + | C1H9g12977 | C2H9g02701 | LOC_Os09g29470 | Os09g0470900 | - | Detail |
| CX9g057569 | 9:15,444,840-15,447,524 | + | C1H9g10138 | C2H9g14076 | LOC_Os09g29480 | Os09g0471000 | - | Detail |
| CX9g057583 | 9:15,448,140-15,451,021 | - | C1H9g26480 | C2H9g19233 | LOC_Os09g29490 | Os09g0471100 | - | Detail |
| CX9g057800 | 9:15,452,934-15,453,422 | + | - | - | - | - | - | Detail |
| CX9g055969 | 9:15,511,539-15,518,657 | + | C1H9g20642 | C2H9g07478 | LOC_Os09g29630 | Os09g0471900 | - | Detail |
| CX9g057043 | 9:15,532,007-15,536,765 | + | C1H9g08939 | C2H9g29453 | LOC_Os09g29660 | Os09g0472100 | - | Detail |
| CX9g056707 | 9:15,542,573-15,548,344 | + | C1H9g25191 | C2H9g26402 | LOC_Os09g29670 | Os09g0472200 | - | Detail |
| CX9g055667 | 9:15,557,663-15,558,280 | + | C1H9g11474 | C2H9g12229 | LOC_Os09g29710 | Os09g0472900 | - | Detail |
| CX9g056808 | 9:15,563,461-15,568,229 | - | C1H9g17348 | C2H9g28895 | LOC_Os09g29750 | Os09g0473300 | - | Detail |
| CX9g056261 | 9:15,568,505-15,569,704 | + | C1H9g19271 | C2H9g16579 | LOC_Os09g29760 | Os09g0473400 | Fse5, OsPORR1 | Detail |
| CX9g056493 | 9:15,574,029-15,574,490 | + | C1H9g18707 | - | - | Os09g0473600 | - | Detail |
| CX9g058096 | 9:15,576,186-15,576,710 | - | - | - | LOC_Os09g29780 | - | - | Detail |
| CX9g056116 | 9:15,577,684-15,587,110 | - | C1H9g00063 | C2H9g03320 | LOC_Os09g29790 | Os09g0473800 | - | Detail |
| CX9g054870 | 9:15,587,514-15,589,436 | + | - | - | - | - | - | Detail |
| CX9g057774 | 9:15,591,680-15,595,256 | + | C1H9g11476 | C2H9g13471 | LOC_Os09g29810 | Os09g0473966 | - | Detail |
| CX9g054922 | 9:15,597,212-15,597,517 | - | C1H9g22246 | C2H9g15762 | LOC_Os09g29820 | Os09g0474000 | OsbZIP73, bZIP73, OsTFX1 | Detail |
| CX9g058110 | 9:15,609,215-15,618,361 | + | C1H9g24853 | C2H9g23427 | LOC_Os09g29830 | Os09g0474100 | - | Detail |
| CX9g057166 | 9:15,633,177-15,637,542 | - | C1H9g14949 | C2H9g15882 | LOC_Os09g29840 | Os09g0474300 | - | Detail |