| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23472 | 3:13,488,878-13,491,031 | - | C1H3g01567 | - | LOC_Os03g26791 | Os03g0385301 | - | Detail |
| C2H3g04342 | 3:13,494,165-13,494,916 | + | C1H3g30590 | CX3g027750 | LOC_Os03g26820 | Os03g0385400 | - | Detail |
| C2H3g13722 | 3:13,498,110-13,500,533 | + | C1H3g30590 | CX3g027750 | LOC_Os03g26820 | Os03g0385400 | - | Detail |
| C2H3g05960 | 3:13,514,899-13,516,145 | - | C1H3g25255 | CX3g028822 | LOC_Os03g26860 | Os03g0385900 | - | Detail |
| C2H3g18357 | 3:13,520,855-13,526,312 | + | C1H3g24605 | CX3g027474 | LOC_Os03g26870 | Os03g0386000 | SRWD5, SRWD5, OsWD40-73 | Detail |
| C2H3g30684 | 3:13,526,650-13,527,163 | - | C1H3g14788 | CX3g028061 | LOC_Os02g24750 | Os03g0562000 | - | Detail |
| C2H3g21328 | 3:13,529,872-13,531,736 | - | C1H3g29954 | CX3g026750 | - | - | - | Detail |
| C2H3g25176 | 3:13,591,952-13,594,378 | + | C1H3g27294 | CX3g027835 | LOC_Os03g26910 | Os03g0386500 | - | Detail |
| C2H3g11441 | 3:13,609,975-13,612,351 | + | C1H3g19318 | CX3g024963 | LOC_Os03g26920 | Os03g0386700 | - | Detail |
| C2H3g16874 | 3:13,615,251-13,618,104 | + | C1H3g12347 | CX3g024963 | LOC_Os03g26930 | Os03g0386800 | - | Detail |
| C2H3g12157 | 3:13,629,150-13,638,501 | + | C1H3g25240 | CX3g030527 | LOC_Os03g26960 | Os03g0387000 | OsDNA2_2 | Detail |
| C2H3g05360 | 3:13,639,657-13,644,369 | + | C1H3g24830 | CX3g026325 | LOC_Os03g26970 | Os03g0387100 | TT1, OsPAB1, PAB1, OsTT1 | Detail |
| C2H3g15032 | 3:13,678,496-13,680,812 | + | C1H3g00426 | CX3g025602 | LOC_Os03g27010 | Os03g0387800 | - | Detail |
| C2H3g04609 | 3:13,688,133-13,690,891 | - | - | CX5g039361 | - | - | - | Detail |
| C2H3g04924 | 3:13,696,106-13,702,078 | + | C1H3g07066 | CX3g030395 | LOC_Os03g27019 | Os03g0387900 | - | Detail |
| C2H3g03183 | 3:13,704,052-13,706,460 | - | C1H3g24480 | CX3g026341 | LOC_Os03g27030 | Os03g0388000 | - | Detail |
| C2H3g20630 | 3:13,708,132-13,709,434 | - | C1H3g21976 | CX3g027742 | LOC_Os03g27040 | Os03g0388100 | - | Detail |
| C2H3g29219 | 3:13,726,053-13,738,286 | + | C1H3g00293 | CX3g030335 | LOC_Os03g27080 | Os03g0388500 | - | Detail |
| C2H3g29965 | 3:13,743,135-13,744,482 | - | C1H3g09239 | CX3g028996 | LOC_Os03g27090 | Os03g0388600 | Os2R_MYB38 | Detail |
| C2H3g12804 | 3:13,757,085-13,758,821 | + | C1H3g24884 | CX3g027644 | LOC_Os03g27110 | Os03g0388800 | OsSG34 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056678 | 9:14,899,856-14,905,719 | + | C1H9g17506 | C2H9g22499 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| CX9g055800 | 9:14,908,532-14,910,267 | - | C1H9g21504 | C2H9g09485 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| CX9g056670 | 9:14,911,895-14,917,896 | + | C1H9g14790 | C2H9g28847 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| CX9g058122 | 9:14,918,449-14,919,006 | + | C1H9g01031 | C2H9g21780 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| CX9g055880 | 9:14,924,041-14,924,358 | + | C1H9g23501 | - | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| CX9g057359 | 9:14,930,355-14,930,651 | + | C1H9g27925 | - | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| CX9g057341 | 9:14,939,756-14,939,908 | - | - | - | - | - | - | Detail |
| CX9g057120 | 9:14,950,137-14,950,709 | - | - | - | - | - | - | Detail |
| CX9g057425 | 9:14,954,407-14,955,135 | - | - | - | - | - | - | Detail |
| CX9g056105 | 9:14,962,499-14,966,990 | - | C1H9g01784 | C2H9g17751 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| CX9g057640 | 9:14,971,152-14,982,461 | + | C1H9g28087 | C2H9g06752 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| CX9g057488 | 9:14,983,998-14,984,318 | + | C1H9g27185 | - | - | - | - | Detail |
| CX9g055374 | 9:14,986,214-14,987,503 | - | C1H9g15128 | C2H9g25937 | - | Os09g0459900 | - | Detail |
| CX9g055458 | 9:14,995,247-14,995,854 | + | C1H9g10045 | C2H8g25958 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| CX9g056394 | 9:14,998,357-14,999,220 | + | C1H9g20930 | C2H9g01353 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| CX9g055971 | 9:15,008,281-15,014,374 | + | C1H9g17836 | C2H9g17816 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| CX9g057311 | 9:15,061,235-15,063,756 | + | C1H9g18452 | C2H9g27701 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| CX9g056435 | 9:15,066,068-15,066,361 | + | C1H9g29610 | C2H9g19629 | LOC_Os09g28780 | - | - | Detail |
| CX9g054937 | 9:15,067,392-15,067,556 | + | - | - | - | - | - | Detail |
| CX9g055048 | 9:15,076,393-15,080,502 | + | C1H9g28013 | C2H9g05705 | LOC_Os09g28810 | Os09g0462700 | - | Detail |