| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09033 | 1:411,905-423,479 | + | C1H1g12709 | CX1g004858 | LOC_Os01g01830 | Os01g0108200 | - | Detail |
| C2H1g30343 | 1:429,845-431,930 | + | C1H1g08683 | CX1g006268 | LOC_Os01g01840 | Os01g0108400 | - | Detail |
| C2H1g23960 | 1:440,181-442,624 | + | C1H1g11414 | CX1g002791 | LOC_Os01g01870 | Os01g0108600 | - | Detail |
| C2H1g19907 | 1:446,175-447,165 | + | C1H1g06105 | CX1g005800 | - | Os01g0108800 | - | Detail |
| C2H1g02003 | 1:447,227-448,126 | + | C1H1g06105 | CX1g005800 | LOC_Os01g01890 | - | - | Detail |
| C2H1g26140 | 1:452,593-459,871 | + | C1H1g07324 | CX1g006717 | LOC_Os01g01920 | Os01g0109300 | WFSL1, ST3, OsSAMHD1 | Detail |
| C2H1g08730 | 1:460,469-461,194 | + | - | CX1g003141 | LOC_Os01g01930 | - | - | Detail |
| C2H1g04643 | 1:462,073-462,789 | + | C1H1g25672 | CX1g002043 | LOC_Os01g01940 | Os01g0109500 | - | Detail |
| C2H1g05030 | 1:465,063-474,582 | - | C1H1g19369 | CX1g002189 | LOC_Os01g01960 | Os01g0109700 | - | Detail |
| C2H1g22311 | 1:477,910-479,562 | - | C1H1g20420 | CX1g007051 | LOC_Os01g01970 | Os01g0109750 | - | Detail |
| C2H1g21187 | 1:495,078-500,683 | + | C1H1g31250 | CX1g002134 | LOC_Os01g02000 | Os01g0110100 | PHO1;1, OsPHO1;1 | Detail |
| C2H1g20426 | 1:500,725-501,833 | - | C1H1g24670 | CX1g005182 | - | Os01g0110200 | - | Detail |
| C2H1g06307 | 1:504,199-507,588 | + | C1H1g18826 | CX1g002536 | LOC_Os01g02020 | Os01g0110400 | - | Detail |
| C2H1g08045 | 1:508,740-512,790 | - | C1H1g08982 | CX1g006024 | LOC_Os01g02040 | Os01g0110500 | - | Detail |
| C2H1g03397 | 1:511,189-512,022 | + | - | CX1g001649 | - | Os01g0110600 | - | Detail |
| C2H1g24290 | 1:516,876-517,687 | + | C1H1g06776 | - | - | Os01g0763900 | - | Detail |
| C2H1g03511 | 1:518,111-528,014 | - | C1H1g18501 | CX1g005092 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| C2H1g15524 | 1:532,388-535,436 | - | C1H1g27492 | CX1g001240 | LOC_Os01g02060 | Os01g0110800 | - | Detail |
| C2H1g11966 | 1:540,514-541,083 | + | C1H1g19659 | CX1g006065 | LOC_Os01g02070 | Os01g0111000 | OsPMEI1 | Detail |
| C2H1g07695 | 1:541,316-542,306 | - | C1H1g17243 | CX1g003369 | LOC_Os01g02080 | Os01g0111100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056678 | 9:14,899,856-14,905,719 | + | C1H9g17506 | C2H9g22499 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| CX9g055800 | 9:14,908,532-14,910,267 | - | C1H9g21504 | C2H9g09485 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| CX9g056670 | 9:14,911,895-14,917,896 | + | C1H9g14790 | C2H9g28847 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| CX9g058122 | 9:14,918,449-14,919,006 | + | C1H9g01031 | C2H9g21780 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| CX9g055880 | 9:14,924,041-14,924,358 | + | C1H9g23501 | - | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| CX9g057359 | 9:14,930,355-14,930,651 | + | C1H9g27925 | - | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| CX9g057341 | 9:14,939,756-14,939,908 | - | - | - | - | - | - | Detail |
| CX9g057120 | 9:14,950,137-14,950,709 | - | - | - | - | - | - | Detail |
| CX9g057425 | 9:14,954,407-14,955,135 | - | - | - | - | - | - | Detail |
| CX9g056105 | 9:14,962,499-14,966,990 | - | C1H9g01784 | C2H9g17751 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| CX9g057640 | 9:14,971,152-14,982,461 | + | C1H9g28087 | C2H9g06752 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| CX9g057488 | 9:14,983,998-14,984,318 | + | C1H9g27185 | - | - | - | - | Detail |
| CX9g055374 | 9:14,986,214-14,987,503 | - | C1H9g15128 | C2H9g25937 | - | Os09g0459900 | - | Detail |
| CX9g055458 | 9:14,995,247-14,995,854 | + | C1H9g10045 | C2H8g25958 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| CX9g056394 | 9:14,998,357-14,999,220 | + | C1H9g20930 | C2H9g01353 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| CX9g055971 | 9:15,008,281-15,014,374 | + | C1H9g17836 | C2H9g17816 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| CX9g057311 | 9:15,061,235-15,063,756 | + | C1H9g18452 | C2H9g27701 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| CX9g056435 | 9:15,066,068-15,066,361 | + | C1H9g29610 | C2H9g19629 | LOC_Os09g28780 | - | - | Detail |
| CX9g054937 | 9:15,067,392-15,067,556 | + | - | - | - | - | - | Detail |
| CX9g055048 | 9:15,076,393-15,080,502 | + | C1H9g28013 | C2H9g05705 | LOC_Os09g28810 | Os09g0462700 | - | Detail |