| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g23824 | 8:12,454,897-12,461,806 | + | C1H8g02665 | CX8g051569 | LOC_Os08g25460 | Os08g0343300 | - | Detail |
| C2H8g03561 | 8:12,487,885-12,492,893 | + | C1H8g03422 | CX8g054265 | LOC_Os08g25570 | Os08g0344100 | HDA705 | Detail |
| C2H8g01292 | 8:12,497,487-12,500,160 | + | C1H8g26450 | CX8g053409 | LOC_Os08g25590 | Os08g0344300 | - | Detail |
| C2H8g11790 | 8:12,517,572-12,524,502 | + | C1H8g10651 | CX8g052320 | LOC_Os08g25624 | Os08g0344600 | - | Detail |
| C2H8g12513 | 8:12,532,056-12,534,722 | - | C1H8g20278 | - | LOC_Os08g25650 | Os08g0344700 | - | Detail |
| C2H8g16407 | 8:12,563,415-12,567,630 | + | C1H8g25968 | CX8g052031 | LOC_Os08g25700 | Os08g0345400 | - | Detail |
| C2H8g24323 | 8:12,568,325-12,571,849 | - | C1H8g12292 | CX8g052325 | LOC_Os08g25710 | Os08g0345500 | OsCSLD3 | Detail |
| C2H8g06425 | 8:12,586,267-12,591,745 | + | C1H8g12100 | CX8g050703 | LOC_Os08g25720 | Os08g0345700 | - | Detail |
| C2H8g27123 | 8:12,594,021-12,598,874 | - | C1H8g19081 | CX8g051031 | LOC_Os08g25734 | Os08g0345800 | - | Detail |
| C2H8g28985 | 8:12,629,432-12,629,862 | + | C1H8g07083 | CX8g052103 | LOC_Os08g25799 | Os08g0346400 | - | Detail |
| C2H8g06241 | 8:12,637,104-12,637,373 | + | C1H8g08620 | CX8g052778 | LOC_Os08g25799 | Os08g0346400 | - | Detail |
| C2H8g09478 | 8:12,646,233-12,652,253 | + | C1H8g10093 | CX8g052103 | LOC_Os08g25820 | Os08g0346500 | - | Detail |
| C2H8g20463 | 8:12,667,391-12,669,572 | - | C1H8g17213 | - | LOC_Os08g25839 | Os08g0346900 | - | Detail |
| C2H8g27458 | 8:12,689,000-12,693,494 | - | C1H8g08615 | - | LOC_Os08g25860 | - | - | Detail |
| C2H8g14625 | 8:12,698,530-12,698,766 | - | C1H8g17213 | - | LOC_Os08g25839 | Os08g0346900 | - | Detail |
| C2H8g01255 | 8:12,703,999-12,705,053 | - | C1H8g00829 | - | LOC_Os08g25850 | Os08g0347000 | - | Detail |
| C2H8g06999 | 8:12,749,801-12,752,239 | - | C1H8g00829 | - | LOC_Os08g25850 | Os08g0347000 | - | Detail |
| C2H8g24907 | 8:12,774,800-12,775,116 | - | C1H8g04458 | CX8g054180 | - | - | - | Detail |
| C2H8g05957 | 8:12,785,155-12,785,880 | - | C1H8g04474 | - | LOC_Os08g25890 | Os08g0347500 | - | Detail |
| C2H8g27009 | 8:12,787,149-12,791,563 | - | C1H8g14252 | CX8g052327 | LOC_Os08g25900 | Os08g0347500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056678 | 9:14,899,856-14,905,719 | + | C1H9g17506 | C2H9g22499 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| CX9g055800 | 9:14,908,532-14,910,267 | - | C1H9g21504 | C2H9g09485 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| CX9g056670 | 9:14,911,895-14,917,896 | + | C1H9g14790 | C2H9g28847 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| CX9g058122 | 9:14,918,449-14,919,006 | + | C1H9g01031 | C2H9g21780 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| CX9g055880 | 9:14,924,041-14,924,358 | + | C1H9g23501 | - | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| CX9g057359 | 9:14,930,355-14,930,651 | + | C1H9g27925 | - | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| CX9g057341 | 9:14,939,756-14,939,908 | - | - | - | - | - | - | Detail |
| CX9g057120 | 9:14,950,137-14,950,709 | - | - | - | - | - | - | Detail |
| CX9g057425 | 9:14,954,407-14,955,135 | - | - | - | - | - | - | Detail |
| CX9g056105 | 9:14,962,499-14,966,990 | - | C1H9g01784 | C2H9g17751 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| CX9g057640 | 9:14,971,152-14,982,461 | + | C1H9g28087 | C2H9g06752 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| CX9g057488 | 9:14,983,998-14,984,318 | + | C1H9g27185 | - | - | - | - | Detail |
| CX9g055374 | 9:14,986,214-14,987,503 | - | C1H9g15128 | C2H9g25937 | - | Os09g0459900 | - | Detail |
| CX9g055458 | 9:14,995,247-14,995,854 | + | C1H9g10045 | C2H8g25958 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| CX9g056394 | 9:14,998,357-14,999,220 | + | C1H9g20930 | C2H9g01353 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| CX9g055971 | 9:15,008,281-15,014,374 | + | C1H9g17836 | C2H9g17816 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| CX9g057311 | 9:15,061,235-15,063,756 | + | C1H9g18452 | C2H9g27701 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| CX9g056435 | 9:15,066,068-15,066,361 | + | C1H9g29610 | C2H9g19629 | LOC_Os09g28780 | - | - | Detail |
| CX9g054937 | 9:15,067,392-15,067,556 | + | - | - | - | - | - | Detail |
| CX9g055048 | 9:15,076,393-15,080,502 | + | C1H9g28013 | C2H9g05705 | LOC_Os09g28810 | Os09g0462700 | - | Detail |