| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g30720 | 2:26,402,932-26,407,801 | + | C2H2g26485 | CX2g020990 | LOC_Os02g46930 | Os02g0696700 | JMJ707 | Detail |
| C1H2g01605 | 2:26,415,504-26,420,657 | + | C2H2g08332 | CX2g022564 | LOC_Os02g46940 | Os02g0696900 | - | Detail |
| C1H2g00090 | 2:26,430,394-26,433,611 | + | C2H2g01904 | CX2g024745 | LOC_Os02g46956 | Os02g0697200 | - | Detail |
| C1H2g12534 | 2:26,434,689-26,438,540 | + | C2H2g16657 | CX2g022468 | LOC_Os02g46962 | Os02g0697300 | - | Detail |
| C1H2g06035 | 2:26,438,857-26,443,104 | - | C2H2g27000 | CX2g023465 | LOC_Os02g46970 | Os02g0697400 | 4CL2, Os4CL2 | Detail |
| C1H2g11528 | 2:26,444,687-26,446,925 | - | C2H2g05522 | CX2g020256 | LOC_Os02g46980 | Os02g0697500 | - | Detail |
| C1H2g31638 | 2:26,450,091-26,454,661 | + | C2H2g00397 | CX2g021170 | LOC_Os02g46990 | Os02g0697600 | - | Detail |
| C1H2g04653 | 2:26,455,536-26,456,909 | - | C2H2g14923 | CX2g022742 | LOC_Os02g47000 | Os02g0697700 | - | Detail |
| C1H2g09723 | 2:26,457,220-26,460,714 | + | C2H2g29054 | CX2g021805 | LOC_Os02g47010 | Os02g0697800 | - | Detail |
| C1H2g14448 | 2:26,462,176-26,464,591 | + | C2H2g27677 | CX2g024307 | LOC_Os02g47020 | Os02g0698000 | - | Detail |
| C1H2g18534 | 2:26,463,258-26,466,489 | - | C2H2g18315 | CX2g021243 | LOC_Os02g47030 | Os02g0698100 | - | Detail |
| C1H2g02655 | 2:26,481,625-26,485,711 | + | C2H2g18843 | CX2g024217 | LOC_Os02g47060 | Os02g0698800 | - | Detail |
| C1H2g03123 | 2:26,506,009-26,508,636 | + | C2H2g14858 | CX2g023002 | LOC_Os02g47090 | Os02g0699000 | OsNPF7.2 | Detail |
| C1H2g20162 | 2:26,513,273-26,516,054 | + | C2H2g19221 | CX2g021504 | LOC_Os02g47110 | Os02g0128600 | - | Detail |
| C1H2g00453 | 2:26,517,826-26,524,518 | + | C2H2g09814 | CX2g024335 | LOC_Os02g47120 | Os02g0699400 | RSH3c | Detail |
| C1H2g18165 | 2:26,526,303-26,529,683 | + | C2H2g10795 | CX2g024576 | LOC_Os02g47130 | Os02g0699500 | - | Detail |
| C1H2g01131 | 2:26,534,134-26,541,370 | - | C2H2g13651 | CX2g023323 | LOC_Os02g47150 | Os02g0699700 | - | Detail |
| C1H2g29663 | 2:26,548,710-26,554,847 | - | C2H2g14562 | - | - | - | - | Detail |
| C1H2g31566 | 2:26,556,058-26,560,028 | - | C2H2g29805 | CX2g020522 | LOC_Os02g47170 | Os02g0700000 | - | Detail |
| C1H2g13530 | 2:26,563,384-26,566,151 | + | C2H2g18839 | CX2g019762 | LOC_Os02g47180 | Os02g0700100 | CDC20.2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056678 | 9:14,899,856-14,905,719 | + | C1H9g17506 | C2H9g22499 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| CX9g055800 | 9:14,908,532-14,910,267 | - | C1H9g21504 | C2H9g09485 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| CX9g056670 | 9:14,911,895-14,917,896 | + | C1H9g14790 | C2H9g28847 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| CX9g058122 | 9:14,918,449-14,919,006 | + | C1H9g01031 | C2H9g21780 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| CX9g055880 | 9:14,924,041-14,924,358 | + | C1H9g23501 | - | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| CX9g057359 | 9:14,930,355-14,930,651 | + | C1H9g27925 | - | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| CX9g057341 | 9:14,939,756-14,939,908 | - | - | - | - | - | - | Detail |
| CX9g057120 | 9:14,950,137-14,950,709 | - | - | - | - | - | - | Detail |
| CX9g057425 | 9:14,954,407-14,955,135 | - | - | - | - | - | - | Detail |
| CX9g056105 | 9:14,962,499-14,966,990 | - | C1H9g01784 | C2H9g17751 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| CX9g057640 | 9:14,971,152-14,982,461 | + | C1H9g28087 | C2H9g06752 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| CX9g057488 | 9:14,983,998-14,984,318 | + | C1H9g27185 | - | - | - | - | Detail |
| CX9g055374 | 9:14,986,214-14,987,503 | - | C1H9g15128 | C2H9g25937 | - | Os09g0459900 | - | Detail |
| CX9g055458 | 9:14,995,247-14,995,854 | + | C1H9g10045 | C2H8g25958 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| CX9g056394 | 9:14,998,357-14,999,220 | + | C1H9g20930 | C2H9g01353 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| CX9g055971 | 9:15,008,281-15,014,374 | + | C1H9g17836 | C2H9g17816 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| CX9g057311 | 9:15,061,235-15,063,756 | + | C1H9g18452 | C2H9g27701 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| CX9g056435 | 9:15,066,068-15,066,361 | + | C1H9g29610 | C2H9g19629 | LOC_Os09g28780 | - | - | Detail |
| CX9g054937 | 9:15,067,392-15,067,556 | + | - | - | - | - | - | Detail |
| CX9g055048 | 9:15,076,393-15,080,502 | + | C1H9g28013 | C2H9g05705 | LOC_Os09g28810 | Os09g0462700 | - | Detail |