| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g28957 | 7:2,647,987-2,652,222 | + | C2H7g18578 | CX7g049267 | LOC_Os07g06440 | Os07g0158200 | - | Detail |
| C1H7g02643 | 7:2,651,703-2,653,336 | - | C2H7g19887 | CX7g050246 | LOC_Os07g06450 | Os07g0158300 | - | Detail |
| C1H7g15593 | 7:2,656,690-2,659,367 | - | C2H7g15754 | CX7g049108 | LOC_Os07g06470 | Os07g0158500 | OsNF-YA5, HAP2J | Detail |
| C1H7g02820 | 7:2,677,083-2,679,280 | - | C2H7g01924 | CX7g046696 | LOC_Os07g06490 | Os07g0158800 | - | Detail |
| C1H7g07397 | 7:2,681,957-2,684,901 | - | C2H7g18089 | CX7g050343 | LOC_Os07g06500 | Os07g0158900 | - | Detail |
| C1H7g13625 | 7:2,691,817-2,695,579 | - | C2H7g14307 | CX7g048728 | LOC_Os07g06550 | Os07g0159500 | - | Detail |
| C1H7g22938 | 7:2,698,405-2,700,640 | - | C2H7g04198 | CX7g046097 | LOC_Os07g06570 | Os07g0159700 | - | Detail |
| C1H7g17805 | 7:2,707,744-2,711,018 | + | C2H7g29566 | CX7g049953 | LOC_Os07g06590 | Os07g0159800 | - | Detail |
| C1H7g06689 | 7:2,714,213-2,714,669 | - | - | - | - | - | - | Detail |
| C1H7g21339 | 7:2,716,199-2,723,218 | + | C2H7g00845 | CX7g050126 | LOC_Os07g06610 | Os07g0160000 | - | Detail |
| C1H7g04752 | 7:2,731,150-2,738,207 | + | C2H7g20693 | CX7g047043 | LOC_Os07g06620 | Os07g0160100 | - | Detail |
| C1H7g02883 | 7:2,751,346-2,753,973 | + | C2H7g17130 | CX7g048609 | - | - | - | Detail |
| C1H7g31839 | 7:2,754,484-2,756,689 | - | C2H7g15323 | CX7g050004 | LOC_Os07g06660 | Os07g0160400 | - | Detail |
| C1H7g10977 | 7:2,761,109-2,764,097 | + | C2H7g04792 | CX7g049818 | LOC_Os07g06670 | Os07g0158900 | - | Detail |
| C1H7g30967 | 7:2,767,302-2,770,708 | + | C2H7g20200 | CX7g046783 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| C1H7g30885 | 7:2,786,046-2,791,677 | - | C2H7g10241 | CX7g047372 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| C1H7g26727 | 7:2,793,829-2,795,835 | + | C2H7g20288 | CX7g046953 | LOC_Os07g06730 | Os07g0161500 | - | Detail |
| C1H7g06448 | 7:2,796,906-2,801,711 | - | C2H7g04340 | CX7g049860 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| C1H7g15459 | 7:2,819,892-2,821,644 | - | C2H7g11082 | CX7g048571 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| C1H7g24248 | 7:2,825,852-2,830,850 | + | C2H7g01313 | CX7g049055 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056678 | 9:14,899,856-14,905,719 | + | C1H9g17506 | C2H9g22499 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| CX9g055800 | 9:14,908,532-14,910,267 | - | C1H9g21504 | C2H9g09485 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| CX9g056670 | 9:14,911,895-14,917,896 | + | C1H9g14790 | C2H9g28847 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| CX9g058122 | 9:14,918,449-14,919,006 | + | C1H9g01031 | C2H9g21780 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| CX9g055880 | 9:14,924,041-14,924,358 | + | C1H9g23501 | - | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| CX9g057359 | 9:14,930,355-14,930,651 | + | C1H9g27925 | - | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| CX9g057341 | 9:14,939,756-14,939,908 | - | - | - | - | - | - | Detail |
| CX9g057120 | 9:14,950,137-14,950,709 | - | - | - | - | - | - | Detail |
| CX9g057425 | 9:14,954,407-14,955,135 | - | - | - | - | - | - | Detail |
| CX9g056105 | 9:14,962,499-14,966,990 | - | C1H9g01784 | C2H9g17751 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| CX9g057640 | 9:14,971,152-14,982,461 | + | C1H9g28087 | C2H9g06752 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| CX9g057488 | 9:14,983,998-14,984,318 | + | C1H9g27185 | - | - | - | - | Detail |
| CX9g055374 | 9:14,986,214-14,987,503 | - | C1H9g15128 | C2H9g25937 | - | Os09g0459900 | - | Detail |
| CX9g055458 | 9:14,995,247-14,995,854 | + | C1H9g10045 | C2H8g25958 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| CX9g056394 | 9:14,998,357-14,999,220 | + | C1H9g20930 | C2H9g01353 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| CX9g055971 | 9:15,008,281-15,014,374 | + | C1H9g17836 | C2H9g17816 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| CX9g057311 | 9:15,061,235-15,063,756 | + | C1H9g18452 | C2H9g27701 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| CX9g056435 | 9:15,066,068-15,066,361 | + | C1H9g29610 | C2H9g19629 | LOC_Os09g28780 | - | - | Detail |
| CX9g054937 | 9:15,067,392-15,067,556 | + | - | - | - | - | - | Detail |
| CX9g055048 | 9:15,076,393-15,080,502 | + | C1H9g28013 | C2H9g05705 | LOC_Os09g28810 | Os09g0462700 | - | Detail |