| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g07965 | 4:8,062,836-8,064,398 | - | C1H4g18604 | CX4g034799 | LOC_Os04g15800 | Os04g0228100 | - | Detail |
| C2H4g27879 | 4:8,068,673-8,069,465 | + | - | - | - | - | - | Detail |
| C2H4g13857 | 4:8,071,384-8,073,190 | + | - | - | LOC_Os04g15820 | Os04g0228300 | - | Detail |
| C2H4g30466 | 4:8,082,123-8,083,022 | + | C1H4g11154 | CX4g032333 | LOC_Os04g15840 | Os04g0228400 | - | Detail |
| C2H4g10956 | 4:8,129,279-8,129,864 | + | - | CX4g036521 | - | Os04g0280700 | - | Detail |
| C2H4g04987 | 4:8,160,953-8,162,712 | + | C1H4g10435 | CX4g032650 | LOC_Os04g15920 | Os04g0229100 | - | Detail |
| C2H4g16212 | 4:8,290,542-8,292,317 | - | C1H4g12432 | CX4g035418 | LOC_Os04g16450 | Os04g0233400 | - | Detail |
| C2H4g27955 | 4:8,334,179-8,334,888 | - | C1H4g05686 | CX4g031918 | - | - | - | Detail |
| C2H4g26981 | 4:8,336,886-8,337,494 | - | C1H4g27994 | CX4g032553 | LOC_Os04g16670 | Os04g0234500 | - | Detail |
| C2H4g10242 | 4:8,340,036-8,342,543 | - | C1H4g21505 | CX4g033851 | LOC_Os04g16680 | Os04g0234600 | - | Detail |
| C2H4g16796 | 4:8,470,714-8,478,041 | + | C1H4g06530 | CX4g036392 | LOC_Os04g17050 | Os04g0244400 | - | Detail |
| C2H4g15471 | 4:8,478,938-8,487,788 | + | C1H4g03282 | CX4g033261 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| C2H4g22629 | 4:8,494,007-8,494,760 | - | C1H4g00844 | CX4g033837 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| C2H4g17703 | 4:8,691,688-8,698,494 | - | C1H4g07475 | CX4g033363 | LOC_Os04g24430 | Os04g0249500 | OsSUS7 | Detail |
| C2H4g28644 | 4:8,711,104-8,713,395 | - | C1H4g12276 | CX4g032666 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| C2H4g18602 | 4:8,798,311-8,799,029 | + | C1H4g04096 | CX4g036578 | LOC_Os04g17700 | Os04g0250700 | - | Detail |
| C2H4g00428 | 4:8,799,890-8,804,869 | + | C1H4g19970 | CX4g036578 | LOC_Os04g24410 | Os04g0250700 | - | Detail |
| C2H4g09941 | 4:8,811,613-8,819,692 | - | C1H4g10578 | CX4g035388 | - | Os04g0251825 | - | Detail |
| C2H4g01240 | 4:8,958,261-8,985,476 | - | C1H4g05815 | CX4g036369 | LOC_Os04g18010 | Os04g0252200 | - | Detail |
| C2H4g12300 | 4:9,000,326-9,017,068 | - | C1H4g20695 | CX4g034469 | LOC_Os04g18030 | Os04g0252400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |