| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20297 | 3:6,328,444-6,329,640 | + | C1H3g22268 | CX3g028385 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| C2H3g00447 | 3:6,331,411-6,336,088 | - | C1H3g22029 | CX3g027164 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| C2H3g06567 | 3:6,342,078-6,344,430 | - | C1H3g04582 | CX3g030874 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| C2H3g02755 | 3:6,345,923-6,347,636 | - | C1H3g27078 | CX3g029207 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| C2H3g08839 | 3:6,364,077-6,368,207 | + | C1H3g26089 | CX3g031242 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| C2H3g17418 | 3:6,369,273-6,371,201 | + | C1H3g13556 | CX3g025226 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| C2H3g00836 | 3:6,371,611-6,375,870 | - | C1H3g13432 | CX3g028197 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| C2H3g23746 | 3:6,376,693-6,380,628 | - | C1H3g17503 | CX3g027179 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| C2H3g02723 | 3:6,382,094-6,387,770 | - | C1H3g27354 | CX3g027179 | LOC_Os03g13274 | Os03g0235900 | - | Detail |
| C2H3g28344 | 3:6,399,499-6,402,406 | + | C1H3g10596 | CX3g025606 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| C2H3g11740 | 3:6,408,151-6,410,478 | - | C1H3g09841 | CX3g027825 | LOC_Os03g13340 | Os03g0236675 | - | Detail |
| C2H3g20390 | 3:6,411,350-6,411,985 | + | C1H3g26140 | CX3g027924 | LOC_Os03g13360 | Os03g0236800 | - | Detail |
| C2H3g08095 | 3:6,413,496-6,414,146 | + | C1H3g26595 | CX3g026764 | LOC_Os03g13370 | Os03g0236900 | - | Detail |
| C2H3g11238 | 3:6,416,401-6,424,841 | + | C1H3g30353 | CX3g030333 | LOC_Os03g13370 | Os03g0236966 | OsAPC6 | Detail |
| C2H3g29074 | 3:6,426,982-6,431,326 | + | C1H3g16967 | CX3g025761 | LOC_Os03g13380 | Os03g0237000 | - | Detail |
| C2H3g13980 | 3:6,433,298-6,435,531 | + | - | - | - | - | - | Detail |
| C2H3g28705 | 3:6,440,316-6,444,240 | - | C1H3g08429 | CX3g027254 | LOC_Os03g13400 | Os03g0237250 | OsIDD14, LPA1 | Detail |
| C2H3g29962 | 3:6,467,615-6,468,157 | + | C1H3g09361 | CX3g028559 | LOC_Os03g13450 | Os03g0237500 | - | Detail |
| C2H3g03025 | 3:6,471,256-6,477,248 | - | C1H3g17244 | CX3g028914 | LOC_Os03g13460 | Os03g0237600 | - | Detail |
| C2H3g23135 | 3:6,484,191-6,488,014 | - | C1H3g24201 | CX3g025055 | LOC_Os03g13480 | Os03g0237950 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |