| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g30398 | 12:464,431-466,073 | - | C1H11g05819 | CX12g017999 | LOC_Os12g01900 | Os11g0109700 | - | Detail |
| C2H12g14314 | 12:466,277-467,170 | - | C1H11g05819 | CX12g017999 | LOC_Os12g01900 | Os12g0109700 | - | Detail |
| C2H12g14425 | 12:469,972-473,953 | + | C1H12g11854 | CX12g015337 | LOC_Os12g01910 | Os12g0109800 | - | Detail |
| C2H12g26139 | 12:475,194-476,642 | - | C1H11g26109 | CX12g015162 | LOC_Os12g01916 | Os12g0109900 | - | Detail |
| C2H12g04773 | 12:476,759-479,129 | - | C1H11g26109 | CX12g015162 | LOC_Os12g01916 | Os12g0109900 | - | Detail |
| C2H12g10658 | 12:480,105-489,851 | - | C1H12g24224 | CX12g015162 | LOC_Os12g01922 | Os12g0110000 | - | Detail |
| C2H12g12112 | 12:494,610-497,730 | - | C1H12g13590 | CX12g017518 | LOC_Os12g01930 | Os12g0110100 | - | Detail |
| C2H12g17021 | 12:498,276-501,483 | - | C1H12g23491 | CX12g015078 | LOC_Os12g01940 | Os12g0110300 | - | Detail |
| C2H12g05654 | 12:501,669-504,116 | + | C1H12g03381 | CX12g016362 | LOC_Os12g01950 | Os12g0110400 | - | Detail |
| C2H12g21050 | 12:520,766-523,470 | + | C1H12g03151 | CX12g015887 | LOC_Os12g02020 | Os12g0111400 | - | Detail |
| C2H12g18672 | 12:523,798-525,367 | - | C1H11g25556 | CX12g016454 | LOC_Os12g02030 | Os12g0111500 | - | Detail |
| C2H12g15668 | 12:530,556-530,966 | - | C1H12g08905 | CX12g018566 | LOC_Os12g02040 | Os12g0111600 | - | Detail |
| C2H12g30261 | 12:533,089-534,966 | + | C1H12g25705 | CX12g016102 | LOC_Os11g02090 | Os12g0111700 | - | Detail |
| C2H12g20566 | 12:537,330-538,857 | + | C1H11g29054 | CX12g016369 | LOC_Os12g02060 | Os12g0111800 | - | Detail |
| C2H12g14717 | 12:539,787-540,555 | - | C1H12g03557 | CX12g016960 | LOC_Os12g02070 | Os12g0416500 | - | Detail |
| C2H12g11323 | 12:547,295-549,507 | + | C1H12g09789 | CX12g017779 | LOC_Os12g02080 | Os12g0112000 | - | Detail |
| C2H12g07351 | 12:550,393-552,985 | + | C1H12g21197 | CX12g016421 | LOC_Os12g02094 | Os12g0112200 | - | Detail |
| C2H12g02181 | 12:554,403-559,835 | + | C1H12g08143 | CX12g016020 | LOC_Os12g02100 | Os12g0112300 | - | Detail |
| C2H12g27918 | 12:560,294-564,540 | + | C1H12g16160 | CX12g017415 | LOC_Os12g02105 | Os12g0112401 | - | Detail |
| C2H12g12409 | 12:562,202-565,120 | - | C1H12g21687 | CX12g018065 | LOC_Os12g02120 | Os12g0112500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |