| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g11211 | 9:8,649,107-8,654,314 | + | C1H9g01176 | CX9g056790 | LOC_Os09g14670 | Os09g0315700 | Osppc2b | Detail |
| C2H9g05805 | 9:8,668,246-8,673,130 | + | C1H9g01176 | CX9g056607 | LOC_Os09g14670 | Os09g0315700 | Osppc2b | Detail |
| C2H9g06318 | 9:8,690,871-8,695,484 | - | C1H9g21120 | CX9g056489 | LOC_Os09g14550 | Os09g0314500 | - | Detail |
| C2H9g11624 | 9:8,699,717-8,700,028 | + | - | - | LOC_Os09g14540 | - | - | Detail |
| C2H9g00957 | 9:8,700,041-8,706,038 | + | C1H9g06365 | CX9g054936 | LOC_Os09g14540 | Os09g0314400 | - | Detail |
| C2H9g09446 | 9:8,712,557-8,714,720 | + | C1H9g23150 | CX9g057252 | LOC_Os09g14520 | Os09g0314333 | - | Detail |
| C2H9g15651 | 9:8,715,969-8,719,137 | - | C1H9g13049 | CX9g057011 | LOC_Os09g14510 | Os09g0314300 | - | Detail |
| C2H9g21549 | 9:8,722,314-8,727,045 | - | C1H9g06144 | CX9g057298 | LOC_Os09g14490 | Os09g0314200 | - | Detail |
| C2H9g16942 | 9:8,751,600-8,753,857 | + | C1H9g19686 | CX9g056972 | LOC_Os09g13940 | Os09g0309700 | ERF109, OsERF109 | Detail |
| C2H9g00565 | 9:8,754,679-8,755,164 | - | C1H9g13827 | CX9g055359 | LOC_Os09g13930 | Os09g0309600 | - | Detail |
| C2H9g12686 | 9:8,759,015-8,759,743 | - | - | CX9g058161 | LOC_Os09g13920 | Os09g0309500 | - | Detail |
| C2H9g19419 | 9:8,773,289-8,775,953 | - | C1H9g15536 | CX9g055203 | LOC_Os09g13890 | Os09g0309200 | - | Detail |
| C2H9g11915 | 9:8,787,909-8,790,535 | + | C1H9g25283 | CX9g057115 | LOC_Os09g13880 | Os09g0309100 | - | Detail |
| C2H9g07921 | 9:8,795,973-8,802,122 | + | C1H9g02405 | CX9g055840 | LOC_Os09g13870 | Os09g0308900 | - | Detail |
| C2H9g15887 | 9:8,816,876-8,817,477 | - | - | CX9g058152 | LOC_Os09g13830 | - | - | Detail |
| C2H9g27130 | 9:8,819,336-8,823,189 | - | C1H9g09555 | CX9g057970 | LOC_Os09g14410 | Os09g0313500 | - | Detail |
| C2H9g19588 | 9:8,884,695-8,892,298 | - | - | CX9g057014 | - | - | - | Detail |
| C2H9g06075 | 9:8,892,068-8,898,947 | + | C1H9g19123 | CX9g056935 | LOC_Os09g13740 | Os09g0307800 | - | Detail |
| C2H9g05059 | 9:8,916,738-8,918,000 | - | C1H9g14767 | CX9g057105 | LOC_Os09g13680 | Os09g0307400 | OsTML, OsWIP6 | Detail |
| C2H9g04611 | 9:8,930,229-8,932,845 | - | C1H9g10709 | CX9g058194 | LOC_Os09g13650 | Os09g0307300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |