| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g23139 | 8:18,545,079-18,546,581 | + | C1H8g09056 | CX8g053945 | LOC_Os08g34550 | Os08g0445000 | WLG, FLW3 | Detail |
| C2H8g08608 | 8:18,566,891-18,570,762 | + | C1H8g27435 | CX8g053319 | LOC_Os08g34580 | Os08g0445700 | - | Detail |
| C2H8g10856 | 8:18,588,363-18,588,629 | - | - | - | - | - | - | Detail |
| C2H8g22394 | 8:18,594,650-18,594,913 | - | - | CX8g050634 | - | - | - | Detail |
| C2H8g01307 | 8:18,595,415-18,601,005 | - | C1H8g27871 | CX8g052049 | LOC_Os08g34640 | Os08g0446200 | - | Detail |
| C2H8g22360 | 8:18,604,362-18,609,803 | - | C1H8g05995 | CX8g052220 | LOC_Os08g34650 | Os08g0446400 | - | Detail |
| C2H8g09851 | 8:18,618,879-18,619,358 | - | - | - | - | - | - | Detail |
| C2H8g13594 | 8:18,653,575-18,654,117 | + | - | CX8g050530 | LOC_Os08g34700 | Os08g0446800 | - | Detail |
| C2H8g13972 | 8:18,667,717-18,672,830 | - | C1H8g18214 | CX8g054140 | LOC_Os08g34720 | Os08g0447000 | OsPGDH2 | Detail |
| C2H8g16164 | 8:18,681,153-18,686,708 | - | C1H8g06120 | CX8g052869 | LOC_Os08g34740 | Os08g0447200 | - | Detail |
| C2H8g22909 | 8:18,687,773-18,692,200 | - | C1H8g08693 | CX8g054614 | LOC_Os08g34750 | Os08g0447300 | - | Detail |
| C2H8g14072 | 8:18,700,033-18,704,179 | - | C1H8g31742 | CX8g052274 | LOC_Os08g34760 | Os08g0447500 | - | Detail |
| C2H8g26353 | 8:18,712,108-18,715,555 | + | C1H8g18525 | CX8g053619 | LOC_Os08g34780 | Os08g0447900 | - | Detail |
| C2H8g22911 | 8:18,715,821-18,718,222 | - | C1H8g31226 | CX8g051108 | LOC_Os08g34790 | Os08g0448000 | 4CL5, Os4CL5 | Detail |
| C2H8g12679 | 8:18,731,972-18,732,463 | + | - | CX8g052718 | LOC_Os08g34800 | Os08g0448100 | - | Detail |
| C2H8g14648 | 8:18,739,741-18,742,671 | + | C1H8g20059 | - | LOC_Os08g34860 | - | - | Detail |
| C2H8g03859 | 8:18,764,313-18,767,945 | + | C1H8g26316 | CX8g051958 | LOC_Os08g34900 | Os08g0450100 | - | Detail |
| C2H8g08689 | 8:18,768,151-18,770,322 | - | C1H8g08234 | CX8g051427 | LOC_Os08g34910 | Os08g0450200 | - | Detail |
| C2H8g11229 | 8:18,787,839-18,798,176 | + | C1H8g30158 | CX8g050484 | LOC_Os08g34950 | Os08g0450700 | - | Detail |
| C2H8g13684 | 8:18,799,110-18,799,724 | + | C1H1g25658 | CX1g002393 | - | Os01g0912700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |