| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g28733 | 7:23,618,170-23,621,519 | - | C1H7g09159 | CX7g047198 | - | - | - | Detail |
| C2H7g26067 | 7:23,623,164-23,623,831 | + | C1H7g00938 | CX7g047207 | LOC_Os07g47620 | Os07g0673400 | - | Detail |
| C2H7g09265 | 7:23,624,239-23,628,678 | - | C1H7g31315 | CX7g046737 | LOC_Os07g47630 | Os07g0673500 | - | Detail |
| C2H7g20394 | 7:23,640,078-23,640,627 | + | C1H7g20962 | CX7g049451 | LOC_Os07g47670 | Os07g0673900 | HIGD2, OsHIGD2 | Detail |
| C2H7g19852 | 7:23,649,232-23,652,324 | + | C1H7g06842 | CX7g048566 | LOC_Os07g47700 | Os07g0674100 | OsUXS6 | Detail |
| C2H7g01756 | 7:23,653,583-23,654,861 | + | C1H7g10802 | CX7g046295 | LOC_Os07g47710 | Os07g0674200 | - | Detail |
| C2H7g13384 | 7:23,655,922-23,658,123 | - | C1H7g03118 | CX7g046238 | LOC_Os07g47720 | Os07g0674300 | - | Detail |
| C2H7g08649 | 7:23,672,178-23,672,695 | + | C1H7g13115 | CX7g048302 | LOC_Os07g47750 | Os07g0674400 | - | Detail |
| C2H7g03388 | 7:23,674,522-23,675,201 | + | C1H7g31335 | CX7g048276 | LOC_Os07g47760 | Os07g0674500 | - | Detail |
| C2H7g11061 | 7:23,678,200-23,680,461 | + | C1H7g17874 | CX7g049296 | LOC_Os07g47780 | Os07g0674700 | - | Detail |
| C2H7g26596 | 7:23,681,524-23,682,271 | - | C1H7g19502 | CX7g047836 | LOC_Os07g47790 | Os07g0674800 | ERF67, OsERF67 | Detail |
| C2H7g23144 | 7:23,688,860-23,695,337 | + | C1H7g04950 | CX7g046488 | LOC_Os07g47820 | Os07g0675000 | - | Detail |
| C2H7g05760 | 7:23,695,209-23,699,198 | - | C1H7g20565 | CX7g049958 | LOC_Os07g47830 | Os07g0675100 | PME40 | Detail |
| C2H7g26993 | 7:23,711,364-23,712,086 | - | C1H7g17168 | CX7g050157 | LOC_Os07g47850 | - | - | Detail |
| C2H7g06366 | 7:23,716,342-23,718,298 | - | C1H7g31303 | CX7g050157 | LOC_Os07g47850 | - | - | Detail |
| C2H7g26761 | 7:23,747,679-23,749,046 | + | C1H7g23001 | CX7g048942 | LOC_Os07g47960 | Os07g0676600 | OsHLH61 | Detail |
| C2H7g19226 | 7:23,759,108-23,760,712 | + | C1H7g03633 | CX7g048468 | LOC_Os07g47990 | Os07g0676900 | - | Detail |
| C2H7g12876 | 7:23,762,815-23,764,363 | + | C1H7g16862 | CX7g048468 | LOC_Os07g48010 | Os07g0677100 | - | Detail |
| C2H7g27578 | 7:23,767,243-23,768,469 | + | C1H7g20159 | CX7g048468 | LOC_Os07g48020 | Os07g0677200 | - | Detail |
| C2H7g03701 | 7:23,771,444-23,771,629 | + | C1H7g04040 | CX7g048468 | LOC_Os07g48030 | Os07g0677300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |