| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g18825 | 12:20,580,988-20,594,260 | + | C2H12g27703 | CX12g017711 | - | - | - | Detail |
| C1H12g14359 | 12:20,601,437-20,604,264 | - | C2H12g23900 | CX12g018160 | LOC_Os12g40970 | - | - | Detail |
| C1H12g10009 | 12:20,617,963-20,621,069 | + | - | - | - | - | - | Detail |
| C1H12g02524 | 12:20,654,707-20,655,489 | - | C2H12g15774 | CX12g018770 | LOC_Os12g41030 | Os12g0602966 | SKL2-1 | Detail |
| C1H12g14138 | 12:20,656,485-20,656,862 | - | C2H12g00859 | CX12g015042 | - | - | - | Detail |
| C1H12g18431 | 12:20,684,951-20,686,563 | + | C2H11g15715 | CX1g002418 | LOC_Os01g46200 | Os12g0231700 | - | Detail |
| C1H12g21999 | 12:20,687,801-20,690,815 | - | C2H12g02053 | CX12g015892 | LOC_Os12g41060 | Os12g0603300 | - | Detail |
| C1H12g27138 | 12:20,703,788-20,705,945 | - | C2H12g08947 | CX12g018548 | LOC_Os12g40960 | Os12g0602450 | SKL1 | Detail |
| C1H12g22366 | 12:20,716,755-20,719,764 | - | C2H12g13167 | CX12g015892 | LOC_Os12g41060 | Os12g0603300 | - | Detail |
| C1H12g11611 | 12:20,727,791-20,728,402 | - | C2H12g10737 | - | - | - | - | Detail |
| C1H12g06197 | 12:20,740,830-20,742,188 | - | C2H12g20271 | CX12g018729 | LOC_Os12g41090 | Os12g0603700 | - | Detail |
| C1H12g15716 | 12:20,758,346-20,758,852 | + | C2H12g25612 | CX12g015553 | LOC_Os12g41110 | Os12g0603800 | - | Detail |
| C1H12g14337 | 12:20,786,681-20,786,914 | - | C2H12g22105 | CX12g015565 | LOC_Os12g41140 | - | - | Detail |
| C1H12g24392 | 12:20,786,917-20,792,527 | - | C2H12g19927 | CX12g015565 | LOC_Os12g41140 | Os12g0604200 | - | Detail |
| C1H12g04820 | 12:20,801,535-20,802,956 | + | C2H12g22739 | CX12g016903 | LOC_Os12g41160 | Os12g0604500 | - | Detail |
| C1H12g09963 | 12:20,804,710-20,812,253 | + | C2H12g04417 | CX12g017392 | LOC_Os12g41170 | Os12g0604600 | - | Detail |
| C1H12g00965 | 12:20,813,899-20,818,178 | - | C2H12g14370 | CX12g016784 | LOC_Os12g41180 | Os12g0604700 | - | Detail |
| C1H12g10619 | 12:20,824,529-20,828,544 | - | C2H12g22374 | CX12g015334 | LOC_Os12g41190 | Os12g0604800 | - | Detail |
| C1H12g01386 | 12:20,829,528-20,838,311 | - | C2H12g12219 | CX12g016681 | LOC_Os12g41200 | Os12g0605200 | - | Detail |
| C1H12g29532 | 12:20,846,867-20,850,869 | - | C2H12g25034 | CX12g016794 | LOC_Os12g41210 | Os12g0605300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |