| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g20181 | 12:11,313,594-11,313,839 | - | C2H12g13828 | CX12g018704 | - | - | - | Detail |
| C1H12g16910 | 12:11,315,977-11,316,577 | - | C2H12g02410 | - | - | - | - | Detail |
| C1H12g06441 | 12:11,330,129-11,330,661 | + | C2H12g00415 | - | LOC_Os02g37230 | - | - | Detail |
| C1H12g01910 | 12:11,331,051-11,333,182 | + | C2H12g09065 | CX12g015955 | LOC_Os11g31790 | Os11g0519100 | - | Detail |
| C1H12g30950 | 12:11,349,388-11,350,348 | + | C2H12g20354 | CX12g018082 | LOC_Os12g22800 | Os12g0416800 | - | Detail |
| C1H12g26120 | 12:11,391,625-11,395,336 | + | C2H12g20574 | CX12g018104 | LOC_Os12g22880 | Os12g0417300 | - | Detail |
| C1H12g14826 | 12:11,447,646-11,448,208 | + | C2H12g20338 | CX12g018104 | LOC_Os12g22880 | Os12g0418200 | - | Detail |
| C1H12g09974 | 12:11,449,198-11,449,859 | + | C2H12g20338 | - | - | - | - | Detail |
| C1H12g30637 | 12:11,470,460-11,470,660 | - | C2H12g26634 | CX12g015072 | - | - | - | Detail |
| C1H12g13778 | 12:11,470,918-11,471,234 | - | C2H12g07597 | CX12g015072 | LOC_Os12g22960 | - | - | Detail |
| C1H12g27540 | 12:11,491,544-11,492,635 | - | C2H12g14476 | CX12g017329 | - | - | - | Detail |
| C1H12g00561 | 12:11,518,524-11,521,350 | + | C2H12g10909 | CX12g017459 | LOC_Os12g23170 | Os12g0420100 | Os12BGlu38 | Detail |
| C1H12g31720 | 12:11,522,443-11,525,213 | + | C2H12g05004 | CX12g017862 | LOC_Os12g23180 | Os12g0420200 | CSP41b, LGL1 | Detail |
| C1H12g31415 | 12:11,529,905-11,533,025 | + | C2H12g30337 | CX12g016472 | LOC_Os12g23190 | Os12g0420300 | - | Detail |
| C1H12g15106 | 12:11,533,911-11,535,862 | + | C2H12g10280 | CX12g016391 | LOC_Os12g23200 | Os12g0420400 | - | Detail |
| C1H12g20292 | 12:11,589,619-11,589,861 | + | - | CX12g016863 | - | Os12g0420866 | - | Detail |
| C1H12g08853 | 12:11,596,569-11,598,108 | + | C2H12g01063 | CX12g017123 | LOC_Os12g23280 | Os12g0421000 | - | Detail |
| C1H12g09230 | 12:11,618,288-11,619,241 | + | C2H12g06749 | CX12g015903 | LOC_Os12g23310 | Os12g0421300 | - | Detail |
| C1H12g06645 | 12:11,662,151-11,662,635 | - | C2H12g04635 | - | - | - | - | Detail |
| C1H12g30597 | 12:11,664,775-11,666,377 | - | C2H12g13771 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056281 | 9:14,757,934-14,759,209 | - | C1H9g16360 | C2H9g04822 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| CX9g055987 | 9:14,774,156-14,774,410 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056428 | 9:14,776,787-14,777,266 | + | C1H9g13470 | C2H9g07186 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| CX9g054921 | 9:14,786,516-14,788,051 | + | C1H9g14260 | - | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| CX9g055449 | 9:14,791,285-14,792,247 | - | C1H9g26526 | C2H9g21518 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| CX9g055140 | 9:14,794,394-14,795,353 | - | C1H9g30982 | C2H9g21518 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| CX9g057536 | 9:14,802,878-14,806,408 | + | C1H9g04635 | C2H9g30062 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| CX9g057031 | 9:14,809,228-14,809,377 | - | - | - | - | - | - | Detail |
| CX9g057089 | 9:14,810,655-14,813,947 | + | C1H9g15793 | C2H9g07506 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| CX9g057237 | 9:14,821,952-14,823,283 | - | C1H9g14428 | C2H8g02869 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| CX9g054844 | 9:14,824,637-14,824,861 | - | - | - | - | - | - | Detail |
| CX9g055703 | 9:14,828,150-14,828,311 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g057315 | 9:14,834,067-14,839,043 | + | C1H9g07328 | C2H9g21988 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| CX9g057565 | 9:14,848,788-14,851,868 | - | C1H9g05942 | C2H9g18507 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| CX9g056155 | 9:14,873,948-14,875,900 | + | C1H9g07321 | C2H9g27523 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| CX9g057558 | 9:14,883,007-14,884,483 | + | C1H9g27020 | C2H9g05118 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| CX9g055637 | 9:14,890,467-14,892,007 | + | C1H9g14254 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g056052 | 9:14,895,507-14,897,034 | + | C1H9g19292 | C2H9g27891 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| CX9g057605 | 9:14,897,663-14,897,887 | - | - | - | - | Os09g0457833 | - | Detail |
| CX9g056987 | 9:14,898,394-14,899,132 | + | C1H9g18282 | C2H9g20787 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |