| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03424 | 6:24,408,283-24,409,997 | - | C1H6g04835 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C2H6g12858 | 6:24,422,938-24,423,922 | - | - | - | - | - | - | Detail |
| C2H6g07492 | 6:24,427,959-24,428,420 | - | C1H6g06589 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C2H6g20505 | 6:24,434,698-24,435,501 | - | C1H6g00429 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C2H6g02105 | 6:24,435,643-24,437,220 | + | - | CX6g042455 | - | - | - | Detail |
| C2H6g16269 | 6:24,436,756-24,439,505 | - | C1H6g04560 | CX6g044377 | LOC_Os06g46120 | Os06g0672700 | - | Detail |
| C2H6g04402 | 6:24,445,673-24,446,671 | - | C1H6g09876 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C2H6g03521 | 6:24,470,199-24,470,987 | - | C1H6g06204 | CX6g042629 | - | Os06g0674000 | - | Detail |
| C2H6g03862 | 6:24,492,016-24,494,187 | - | C1H6g14950 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C2H6g02186 | 6:24,583,163-24,583,878 | + | - | - | - | - | - | Detail |
| C2H6g00947 | 6:24,634,534-24,639,823 | + | C1H6g03179 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C2H6g16522 | 6:24,662,696-24,666,303 | + | C1H6g03218 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C2H6g30405 | 6:24,669,913-24,680,390 | - | C1H6g29534 | CX6g042747 | LOC_Os06g46284 | Os06g0675700 | ONG3 | Detail |
| C2H6g20637 | 6:24,681,360-24,687,204 | - | C1H6g05961 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C2H6g24034 | 6:24,708,566-24,710,624 | - | C1H6g12474 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C2H6g04890 | 6:24,719,088-24,723,422 | + | C1H6g29534 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C2H6g08388 | 6:24,728,689-24,734,073 | - | C1H6g30642 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C2H6g24564 | 6:24,755,079-24,759,465 | + | C1H6g11720 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C2H6g27620 | 6:24,760,581-24,763,915 | + | C1H6g31002 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C2H6g16974 | 6:24,765,283-24,769,704 | + | C1H6g05901 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g058069 | 9:14,643,641-14,644,972 | + | C1H9g14335 | C2H9g23476 | LOC_Os09g27910 | Os09g0452400 | - | Detail |
| CX9g056047 | 9:14,649,249-14,650,616 | + | C1H9g26506 | C2H9g23476 | LOC_Os09g27940 | Os09g0452800 | - | Detail |
| CX9g056293 | 9:14,652,189-14,655,550 | - | C1H9g30352 | C2H9g03912 | LOC_Os09g27950 | Os09g0452900 | - | Detail |
| CX9g056150 | 9:14,659,641-14,661,751 | - | C1H9g28680 | C2H9g02612 | LOC_Os09g27960 | Os09g0453000 | - | Detail |
| CX9g056673 | 9:14,662,656-14,664,285 | + | C1H9g19635 | C2H9g04673 | LOC_Os09g27980 | Os09g0453200 | - | Detail |
| CX9g056708 | 9:14,664,573-14,665,955 | - | C1H9g20707 | C2H9g04521 | LOC_Os09g27990 | Os09g0453300 | - | Detail |
| CX9g057841 | 9:14,666,943-14,667,095 | + | - | - | - | - | - | Detail |
| CX9g055145 | 9:14,668,561-14,670,817 | - | C1H9g05527 | C2H9g02229 | LOC_Os09g28000 | Os09g0453400 | - | Detail |
| CX9g057106 | 9:14,673,470-14,678,258 | - | C1H9g19567 | C2H9g02526 | LOC_Os09g28019 | Os09g0453500 | - | Detail |
| CX9g057067 | 9:14,680,606-14,681,019 | - | - | - | LOC_Os09g36590 | - | - | Detail |
| CX9g056994 | 9:14,682,031-14,687,844 | - | C1H9g02119 | C2H9g18876 | LOC_Os09g28040 | Os09g0453700 | - | Detail |
| CX9g055414 | 9:14,695,736-14,699,995 | + | C1H9g13901 | C2H9g28821 | LOC_Os09g28050 | Os09g0453800 | - | Detail |
| CX9g057470 | 9:14,705,772-14,707,315 | - | C1H9g00481 | C2H9g28225 | LOC_Os09g28060 | Os09g0453900 | - | Detail |
| CX9g056919 | 9:14,714,771-14,717,895 | + | C1H9g19719 | C2H9g17318 | LOC_Os09g28100 | Os09g0454100 | - | Detail |
| CX9g057696 | 9:14,718,871-14,722,611 | - | C1H9g10992 | C2H9g11334 | LOC_Os09g28110 | Os09g0454200 | - | Detail |
| CX9g058006 | 9:14,727,807-14,729,398 | + | C1H9g00491 | C2H9g24563 | LOC_Os09g28120 | Os09g0454300 | - | Detail |
| CX9g056279 | 9:14,730,536-14,733,929 | - | C1H9g26159 | C2H9g07945 | LOC_Os09g28130 | Os09g0454500 | - | Detail |
| CX9g055863 | 9:14,735,517-14,737,660 | + | C1H9g31005 | C2H9g22728 | LOC_Os09g28160 | Os09g0454600 | - | Detail |
| CX9g055538 | 9:14,741,018-14,743,744 | - | C1H9g28705 | C2H9g16247 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| CX9g056784 | 9:14,744,676-14,744,885 | - | - | - | - | - | - | Detail |