| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g13669 | 5:7,463,795-7,468,267 | - | C2H5g10863 | CX5g039794 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| C1H5g11478 | 5:7,471,901-7,473,157 | - | C2H5g12394 | CX5g039447 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| C1H5g13415 | 5:7,474,950-7,479,303 | + | C2H5g03213 | CX5g038303 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| C1H5g25482 | 5:7,481,388-7,484,201 | + | C2H5g18069 | CX5g038303 | - | Os05g0251500 | - | Detail |
| C1H5g22880 | 5:7,487,995-7,491,891 | + | C2H5g11253 | CX5g037603 | - | - | - | Detail |
| C1H5g03577 | 5:7,489,093-7,494,918 | - | C2H5g17103 | CX5g040268 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| C1H5g13508 | 5:7,497,940-7,502,969 | - | C2H5g24772 | CX5g041044 | LOC_Os05g16290 | Os05g0252000 | - | Detail |
| C1H5g26814 | 5:7,514,364-7,516,023 | - | C2H5g01822 | CX5g037929 | LOC_Os05g16300 | Os05g0252100 | - | Detail |
| C1H5g13165 | 5:7,560,818-7,561,289 | + | C2H5g15484 | CX5g039636 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C1H5g26412 | 5:7,633,753-7,637,377 | + | C2H5g01726 | CX5g040627 | LOC_Os05g16630 | Os05g0255600 | - | Detail |
| C1H5g13724 | 5:7,640,895-7,645,875 | + | C2H5g24880 | CX5g040616 | LOC_Os05g16640 | Os05g0255800 | - | Detail |
| C1H5g15674 | 5:7,650,875-7,656,493 | + | C2H5g00655 | CX5g039252 | LOC_Os05g16660 | Os05g0256000 | - | Detail |
| C1H5g11784 | 5:7,669,303-7,680,295 | + | C2H5g00991 | CX5g038401 | LOC_Os05g16430 | Os05g0256100 | - | Detail |
| C1H5g15820 | 5:7,730,571-7,741,013 | + | C2H5g02628 | CX5g040531 | LOC_Os05g16430 | Os05g0256500 | - | Detail |
| C1H5g24182 | 5:7,766,659-7,776,349 | + | C2H5g15704 | CX5g039056 | LOC_Os05g16430 | Os05g0257100 | - | Detail |
| C1H5g28432 | 5:7,780,957-7,781,515 | + | C2H5g05784 | CX3g030223 | - | - | - | Detail |
| C1H5g26063 | 5:7,817,075-7,823,465 | + | C2H5g12556 | CX5g036934 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C1H5g03004 | 5:7,845,727-7,846,645 | + | C2H5g12556 | CX5g038401 | - | Os05g0261700 | - | Detail |
| C1H5g04336 | 5:7,847,001-7,848,449 | + | C2H5g07983 | CX5g036934 | LOC_Os05g16670 | Os05g0263100 | - | Detail |
| C1H5g16401 | 5:7,855,230-7,860,196 | + | C2H5g15568 | CX5g038074 | LOC_Os05g16740 | Os05g0263100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g058069 | 9:14,643,641-14,644,972 | + | C1H9g14335 | C2H9g23476 | LOC_Os09g27910 | Os09g0452400 | - | Detail |
| CX9g056047 | 9:14,649,249-14,650,616 | + | C1H9g26506 | C2H9g23476 | LOC_Os09g27940 | Os09g0452800 | - | Detail |
| CX9g056293 | 9:14,652,189-14,655,550 | - | C1H9g30352 | C2H9g03912 | LOC_Os09g27950 | Os09g0452900 | - | Detail |
| CX9g056150 | 9:14,659,641-14,661,751 | - | C1H9g28680 | C2H9g02612 | LOC_Os09g27960 | Os09g0453000 | - | Detail |
| CX9g056673 | 9:14,662,656-14,664,285 | + | C1H9g19635 | C2H9g04673 | LOC_Os09g27980 | Os09g0453200 | - | Detail |
| CX9g056708 | 9:14,664,573-14,665,955 | - | C1H9g20707 | C2H9g04521 | LOC_Os09g27990 | Os09g0453300 | - | Detail |
| CX9g057841 | 9:14,666,943-14,667,095 | + | - | - | - | - | - | Detail |
| CX9g055145 | 9:14,668,561-14,670,817 | - | C1H9g05527 | C2H9g02229 | LOC_Os09g28000 | Os09g0453400 | - | Detail |
| CX9g057106 | 9:14,673,470-14,678,258 | - | C1H9g19567 | C2H9g02526 | LOC_Os09g28019 | Os09g0453500 | - | Detail |
| CX9g057067 | 9:14,680,606-14,681,019 | - | - | - | LOC_Os09g36590 | - | - | Detail |
| CX9g056994 | 9:14,682,031-14,687,844 | - | C1H9g02119 | C2H9g18876 | LOC_Os09g28040 | Os09g0453700 | - | Detail |
| CX9g055414 | 9:14,695,736-14,699,995 | + | C1H9g13901 | C2H9g28821 | LOC_Os09g28050 | Os09g0453800 | - | Detail |
| CX9g057470 | 9:14,705,772-14,707,315 | - | C1H9g00481 | C2H9g28225 | LOC_Os09g28060 | Os09g0453900 | - | Detail |
| CX9g056919 | 9:14,714,771-14,717,895 | + | C1H9g19719 | C2H9g17318 | LOC_Os09g28100 | Os09g0454100 | - | Detail |
| CX9g057696 | 9:14,718,871-14,722,611 | - | C1H9g10992 | C2H9g11334 | LOC_Os09g28110 | Os09g0454200 | - | Detail |
| CX9g058006 | 9:14,727,807-14,729,398 | + | C1H9g00491 | C2H9g24563 | LOC_Os09g28120 | Os09g0454300 | - | Detail |
| CX9g056279 | 9:14,730,536-14,733,929 | - | C1H9g26159 | C2H9g07945 | LOC_Os09g28130 | Os09g0454500 | - | Detail |
| CX9g055863 | 9:14,735,517-14,737,660 | + | C1H9g31005 | C2H9g22728 | LOC_Os09g28160 | Os09g0454600 | - | Detail |
| CX9g055538 | 9:14,741,018-14,743,744 | - | C1H9g28705 | C2H9g16247 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| CX9g056784 | 9:14,744,676-14,744,885 | - | - | - | - | - | - | Detail |