| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01356 | 1:22,547,149-22,552,418 | + | C1H1g08197 | CX1g000972 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| C2H1g12475 | 1:22,555,116-22,555,352 | + | - | - | LOC_Os01g43880 | Os01g0629500 | - | Detail |
| C2H1g02903 | 1:22,558,803-22,559,798 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g15801 | 1:22,566,740-22,567,108 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g07937 | 1:22,570,471-22,576,655 | - | C1H1g14568 | CX1g006840 | LOC_Os01g43910 | Os01g0629900 | - | Detail |
| C2H1g22336 | 1:22,609,633-22,616,484 | + | C1H1g00799 | CX1g005258 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| C2H1g25630 | 1:22,617,364-22,620,467 | + | C1H1g26941 | CX1g002535 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| C2H1g14517 | 1:22,637,435-22,643,979 | + | C1H1g05926 | CX1g001624 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| C2H1g24347 | 1:22,651,516-22,652,365 | + | C1H1g08811 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C2H1g14152 | 1:22,675,518-22,679,990 | + | C1H1g07009 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C2H1g16370 | 1:22,684,091-22,692,095 | + | C1H1g05320 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C2H1g06740 | 1:22,707,438-22,709,297 | + | C1H1g12869 | - | - | - | - | Detail |
| C2H1g03548 | 1:22,722,911-22,723,426 | - | C1H1g13707 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C2H1g23506 | 1:22,728,196-22,734,469 | + | C1H1g09519 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C2H1g25610 | 1:22,736,618-22,740,433 | + | C1H1g25629 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C2H1g21259 | 1:22,742,692-22,745,124 | + | C1H1g17417 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C2H1g13154 | 1:22,750,032-22,751,941 | + | C1H1g26792 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C2H1g30459 | 1:22,755,586-22,762,743 | - | C1H1g26567 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C2H1g20909 | 1:22,774,885-22,776,872 | - | C1H1g01839 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C2H1g10174 | 1:22,778,406-22,779,964 | - | C1H1g04340 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055972 | 9:14,480,389-14,482,167 | + | C1H9g31490 | C2H9g17309 | LOC_Os09g27590 | Os09g0448500 | GS9 | Detail |
| CX9g056032 | 9:14,494,500-14,498,029 | + | C1H9g23054 | C2H9g13055 | LOC_Os09g27610 | Os09g0448900 | - | Detail |
| CX9g057956 | 9:14,499,421-14,501,671 | + | C1H9g27006 | C2H9g00544 | LOC_Os09g27620 | Os09g0449000 | OsMS1, PTC1 | Detail |
| CX9g054993 | 9:14,504,488-14,504,886 | - | - | - | - | - | - | Detail |
| CX9g057477 | 9:14,509,224-14,509,484 | - | - | - | - | - | - | Detail |
| CX9g054901 | 9:14,512,381-14,512,979 | + | - | - | - | - | - | Detail |
| CX9g054902 | 9:14,538,613-14,541,074 | + | C1H9g01763 | C2H9g07425 | LOC_Os09g27650 | Os09g0449400 | IDD13 | Detail |
| CX9g058036 | 9:14,548,403-14,549,658 | + | C1H9g25929 | C2H9g06801 | LOC_Os09g27660 | Os09g0449500 | - | Detail |
| CX9g055092 | 9:14,553,237-14,555,168 | + | C1H9g24951 | C2H9g00964 | LOC_Os09g27570 | Os09g0449600 | - | Detail |
| CX9g055187 | 9:14,560,019-14,560,231 | + | - | - | - | Os09g0449700 | - | Detail |
| CX9g056221 | 9:14,563,929-14,566,029 | + | C1H9g21509 | C2H9g26524 | LOC_Os09g27680 | Os09g0449800 | - | Detail |
| CX9g058164 | 9:14,570,244-14,571,401 | + | C1H9g08384 | C2H9g13669 | LOC_Os09g27690 | Os09g0450200 | - | Detail |
| CX9g057479 | 9:14,573,377-14,577,841 | - | C1H9g06430 | C2H9g25772 | LOC_Os09g27700 | Os09g0450300 | - | Detail |
| CX9g057225 | 9:14,593,035-14,593,843 | + | C1H9g22970 | C2H9g17119 | LOC_Os09g27730 | Os09g0450600 | - | Detail |
| CX9g057122 | 9:14,595,804-14,596,910 | - | C1H9g31330 | C2H9g24868 | LOC_Os09g27750 | Os09g0451000 | ACO1, OsACO1, ACO | Detail |
| CX9g055115 | 9:14,610,058-14,611,187 | + | C1H9g25747 | C2H9g13280 | LOC_Os09g27820 | Os09g0451400 | ACO2, OsACO2 | Detail |
| CX9g057921 | 9:14,614,973-14,619,519 | + | C1H9g11732 | C2H9g08067 | LOC_Os09g27830 | Os09g0451500 | PDIL2;3 | Detail |
| CX9g055082 | 9:14,622,881-14,623,485 | + | C1H9g16453 | C2H9g26990 | LOC_Os09g27850 | Os09g0451700 | - | Detail |
| CX9g055736 | 9:14,627,520-14,628,215 | - | - | - | LOC_Os09g27860 | Os09g0451800 | - | Detail |
| CX9g054952 | 9:14,637,154-14,641,265 | + | C1H9g05298 | C2H9g21782 | LOC_Os09g27890 | Os09g0452200 | - | Detail |