| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06554 | 1:1,267,481-1,270,261 | - | C1H1g14698 | CX1g000136 | LOC_Os01g03640 | Os01g0127200 | OsLPR5, OsSTA2 | Detail |
| C2H1g21958 | 1:1,273,959-1,277,999 | - | C1H1g30854 | CX1g005762 | LOC_Os01g03650 | Os01g0127300 | - | Detail |
| C2H1g24576 | 1:1,278,156-1,280,615 | + | C1H1g00412 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C2H1g17865 | 1:1,282,083-1,282,775 | + | C1H1g25838 | CX1g002042 | LOC_Os01g19970 | Os01g0127450 | - | Detail |
| C2H1g02319 | 1:1,283,305-1,284,401 | + | C1H1g17663 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C2H1g19770 | 1:1,285,305-1,285,871 | + | C1H1g11231 | CX1g002886 | LOC_Os01g03680 | Os01g0127600 | - | Detail |
| C2H1g03781 | 1:1,288,272-1,291,329 | + | C1H1g05668 | CX1g006285 | LOC_Os01g03690 | Os01g0127700 | - | Detail |
| C2H1g13836 | 1:1,297,101-1,302,164 | + | C1H1g08835 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C2H1g25959 | 1:1,312,131-1,313,344 | - | C1H1g25654 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C2H1g01385 | 1:1,324,388-1,326,037 | - | C1H1g31764 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C2H1g18960 | 1:1,326,807-1,329,714 | + | C1H1g04042 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C2H1g15883 | 1:1,329,952-1,330,824 | - | C1H1g30874 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C2H1g19347 | 1:1,331,825-1,337,142 | - | C1H1g07436 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C2H1g18545 | 1:1,345,364-1,353,485 | + | C1H1g20521 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C2H1g10390 | 1:1,366,798-1,368,202 | + | C1H1g27481 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C2H1g17049 | 1:1,379,470-1,382,437 | - | C1H1g30507 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C2H1g13371 | 1:1,395,250-1,396,259 | + | C1H1g11492 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C2H1g20654 | 1:1,408,458-1,408,763 | - | - | CX1g003157 | LOC_Os01g03900 | Os01g0129800 | - | Detail |
| C2H1g29639 | 1:1,411,780-1,414,851 | - | C1H1g30416 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C2H1g19941 | 1:1,416,854-1,417,432 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g054851 | 9:14,209,565-14,211,984 | + | C1H9g06228 | C2H9g27420 | LOC_Os09g27040 | Os09g0442400 | OsGEX1 | Detail |
| CX9g058113 | 9:14,218,168-14,221,118 | + | C1H9g28611 | C2H9g03487 | LOC_Os09g27050 | Os09g0442600 | OsRSH3 | Detail |
| CX9g057038 | 9:14,224,698-14,240,404 | - | C1H9g25409 | C2H9g20875 | LOC_Os09g27060 | Os09g0442700 | OsDDM1a | Detail |
| CX9g057769 | 9:14,243,689-14,246,575 | + | C1H9g01438 | C2H9g18109 | LOC_Os09g27070 | Os09g0442800 | - | Detail |
| CX9g056575 | 9:14,249,651-14,253,592 | + | C1H9g25976 | C2H9g05302 | LOC_Os09g27080 | Os09g0442900 | - | Detail |
| CX9g055406 | 9:14,254,633-14,263,132 | - | C1H9g18855 | C2H9g09021 | LOC_Os09g27090 | Os09g0443000 | - | Detail |
| CX9g055710 | 9:14,267,459-14,276,685 | - | C1H9g26138 | - | LOC_Os09g27110 | - | - | Detail |
| CX9g055978 | 9:14,280,574-14,280,741 | - | - | - | - | - | - | Detail |
| CX9g054949 | 9:14,281,231-14,284,141 | - | C1H9g16243 | C2H9g16776 | LOC_Os09g27140 | Os09g0443500 | - | Detail |
| CX9g055339 | 9:14,284,571-14,284,918 | - | - | - | - | - | - | Detail |
| CX9g055154 | 9:14,287,718-14,289,387 | - | C1H9g02557 | C2H9g27037 | LOC_Os09g27150 | Os09g0544300 | - | Detail |
| CX9g056527 | 9:14,291,032-14,292,057 | + | C1H9g23735 | C2H9g09304 | LOC_Os09g27160 | Os09g0443800 | - | Detail |
| CX9g056496 | 9:14,309,580-14,309,828 | - | - | C2H9g15136 | LOC_Os11g38330 | Os11g0596250 | - | Detail |
| CX9g055460 | 9:14,311,631-14,317,913 | - | C1H9g17916 | C2H9g09141 | LOC_Os09g27210 | Os09g0444200 | - | Detail |
| CX9g057848 | 9:14,323,251-14,327,973 | + | C1H9g09508 | C2H9g02894 | LOC_Os09g27220 | Os09g0444500 | OsBRXL5 | Detail |
| CX9g057060 | 9:14,328,836-14,329,006 | + | - | - | - | - | - | Detail |
| CX9g055599 | 9:14,330,986-14,334,890 | - | C1H9g07241 | C2H9g30118 | LOC_Os09g27240 | Os09g0444700 | - | Detail |
| CX9g055792 | 9:14,340,766-14,341,722 | - | C1H9g06596 | C2H9g30118 | LOC_Os09g27260 | Os09g0444900 | - | Detail |
| CX9g057046 | 9:14,342,327-14,342,515 | + | - | - | - | - | - | Detail |
| CX9g057103 | 9:14,350,301-14,350,849 | - | C1H9g26826 | - | LOC_Os09g35640 | - | - | Detail |