| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09690 | 1:5,646,191-5,652,258 | + | C2H1g00290 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C1H1g24673 | 1:5,655,098-5,657,830 | + | C2H1g04999 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C1H1g21326 | 1:5,666,351-5,678,186 | + | C2H1g26585 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C1H1g12724 | 1:5,686,581-5,687,544 | + | C2H1g12652 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C1H1g09961 | 1:5,697,241-5,702,329 | + | C2H1g17909 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C1H1g30290 | 1:5,714,019-5,719,150 | + | C2H1g10690 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C1H1g21863 | 1:5,720,849-5,726,981 | - | C2H1g22932 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C1H1g28664 | 1:5,727,357-5,740,639 | - | C2H1g17937 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C1H1g00514 | 1:5,752,538-5,753,281 | + | C2H1g09244 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C1H1g27900 | 1:5,754,392-5,756,984 | + | C2H1g22718 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C1H1g26992 | 1:5,757,879-5,760,734 | + | C2H1g24979 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C1H1g22028 | 1:5,770,051-5,770,540 | + | C2H1g07180 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C1H1g09843 | 1:5,770,963-5,773,415 | - | C2H1g00052 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C1H1g29203 | 1:5,784,452-5,785,325 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g27823 | 1:5,787,226-5,790,470 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g03057 | 1:5,794,359-5,799,394 | - | C2H1g01177 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C1H1g21223 | 1:5,806,314-5,809,542 | + | C2H1g26925 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C1H1g15416 | 1:5,810,071-5,810,571 | - | C2H1g24533 | - | LOC_Os01g12100 | Os01g0220400 | - | Detail |
| C1H1g25550 | 1:5,814,056-5,815,182 | - | C2H1g24521 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| C1H1g19821 | 1:5,830,205-5,830,851 | + | C2H1g00971 | CX1g004493 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g054851 | 9:14,209,565-14,211,984 | + | C1H9g06228 | C2H9g27420 | LOC_Os09g27040 | Os09g0442400 | OsGEX1 | Detail |
| CX9g058113 | 9:14,218,168-14,221,118 | + | C1H9g28611 | C2H9g03487 | LOC_Os09g27050 | Os09g0442600 | OsRSH3 | Detail |
| CX9g057038 | 9:14,224,698-14,240,404 | - | C1H9g25409 | C2H9g20875 | LOC_Os09g27060 | Os09g0442700 | OsDDM1a | Detail |
| CX9g057769 | 9:14,243,689-14,246,575 | + | C1H9g01438 | C2H9g18109 | LOC_Os09g27070 | Os09g0442800 | - | Detail |
| CX9g056575 | 9:14,249,651-14,253,592 | + | C1H9g25976 | C2H9g05302 | LOC_Os09g27080 | Os09g0442900 | - | Detail |
| CX9g055406 | 9:14,254,633-14,263,132 | - | C1H9g18855 | C2H9g09021 | LOC_Os09g27090 | Os09g0443000 | - | Detail |
| CX9g055710 | 9:14,267,459-14,276,685 | - | C1H9g26138 | - | LOC_Os09g27110 | - | - | Detail |
| CX9g055978 | 9:14,280,574-14,280,741 | - | - | - | - | - | - | Detail |
| CX9g054949 | 9:14,281,231-14,284,141 | - | C1H9g16243 | C2H9g16776 | LOC_Os09g27140 | Os09g0443500 | - | Detail |
| CX9g055339 | 9:14,284,571-14,284,918 | - | - | - | - | - | - | Detail |
| CX9g055154 | 9:14,287,718-14,289,387 | - | C1H9g02557 | C2H9g27037 | LOC_Os09g27150 | Os09g0544300 | - | Detail |
| CX9g056527 | 9:14,291,032-14,292,057 | + | C1H9g23735 | C2H9g09304 | LOC_Os09g27160 | Os09g0443800 | - | Detail |
| CX9g056496 | 9:14,309,580-14,309,828 | - | - | C2H9g15136 | LOC_Os11g38330 | Os11g0596250 | - | Detail |
| CX9g055460 | 9:14,311,631-14,317,913 | - | C1H9g17916 | C2H9g09141 | LOC_Os09g27210 | Os09g0444200 | - | Detail |
| CX9g057848 | 9:14,323,251-14,327,973 | + | C1H9g09508 | C2H9g02894 | LOC_Os09g27220 | Os09g0444500 | OsBRXL5 | Detail |
| CX9g057060 | 9:14,328,836-14,329,006 | + | - | - | - | - | - | Detail |
| CX9g055599 | 9:14,330,986-14,334,890 | - | C1H9g07241 | C2H9g30118 | LOC_Os09g27240 | Os09g0444700 | - | Detail |
| CX9g055792 | 9:14,340,766-14,341,722 | - | C1H9g06596 | C2H9g30118 | LOC_Os09g27260 | Os09g0444900 | - | Detail |
| CX9g057046 | 9:14,342,327-14,342,515 | + | - | - | - | - | - | Detail |
| CX9g057103 | 9:14,350,301-14,350,849 | - | C1H9g26826 | - | LOC_Os09g35640 | - | - | Detail |