| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g26095 | 9:15,490,358-15,491,906 | + | C1H9g31713 | CX9g056933 | LOC_Os09g30320 | Os09g0480900 | RA8, OsBURP15 | Detail |
| C2H9g23422 | 9:15,497,544-15,502,471 | + | C1H9g10108 | CX9g055379 | LOC_Os09g30330 | Os09g0481100 | OsSec14-23 | Detail |
| C2H9g10417 | 9:15,504,281-15,507,633 | - | C1H9g06557 | CX9g056359 | LOC_Os09g30350 | Os09g0481300 | - | Detail |
| C2H9g01903 | 9:15,508,807-15,510,006 | - | C1H9g00807 | CX9g057816 | LOC_Os09g30360 | Os09g0481400 | - | Detail |
| C2H9g12150 | 9:15,514,337-15,518,296 | + | C1H9g16162 | CX9g058098 | LOC_Os09g30380 | Os09g0481600 | - | Detail |
| C2H9g21307 | 9:15,520,305-15,525,251 | - | C1H9g22023 | CX9g056255 | LOC_Os09g30400 | Os09g0481700 | - | Detail |
| C2H9g06242 | 9:15,533,715-15,534,615 | - | C1H9g16418 | CX9g057443 | LOC_Os09g30410 | Os09g0481800 | - | Detail |
| C2H9g03249 | 9:15,535,667-15,537,898 | - | C1H9g08594 | CX9g055277 | LOC_Os09g30411 | Os09g0482000 | - | Detail |
| C2H9g27046 | 9:15,538,351-15,541,958 | - | C1H9g12162 | CX9g057628 | LOC_Os09g30412 | Os09g0482600 | - | Detail |
| C2H9g23476 | 9:15,545,113-15,547,876 | + | C1H9g30961 | CX9g058160 | LOC_Os09g30414 | Os09g0482200 | - | Detail |
| C2H9g03595 | 9:15,547,974-15,548,300 | - | C1H9g13750 | - | LOC_Os09g30418 | Os09g0482550 | - | Detail |
| C2H9g12791 | 9:15,549,217-15,552,923 | - | C1H9g11589 | CX9g054954 | LOC_Os09g30412 | Os09g0482600 | - | Detail |
| C2H9g26838 | 9:15,555,382-15,560,698 | - | C1H9g10634 | CX9g055785 | LOC_Os09g30446 | Os09g0482620 | - | Detail |
| C2H9g26700 | 9:15,561,378-15,563,268 | + | - | - | - | - | - | Detail |
| C2H9g24674 | 9:15,563,331-15,567,735 | + | - | - | LOC_Os04g31090 | - | - | Detail |
| C2H9g10815 | 9:15,569,611-15,572,115 | + | C1H9g28362 | CX9g056722 | LOC_Os09g38910 | Os09g0562600 | WAK92, OsWAK92, OsDEES1-L4 | Detail |
| C2H9g10380 | 9:15,577,242-15,582,603 | - | C1H9g19752 | CX9g057954 | LOC_Os09g30458 | Os09g0482660 | - | Detail |
| C2H9g04333 | 9:15,585,062-15,588,186 | - | C1H9g15788 | CX9g057490 | LOC_Os09g30466 | Os09g0482680 | OsaTRZ2 | Detail |
| C2H9g30076 | 9:15,588,872-15,592,865 | - | C1H9g12404 | CX9g057638 | LOC_Os09g30474 | Os09g0482720 | - | Detail |
| C2H9g14515 | 9:15,608,957-15,613,286 | + | C1H9g00782 | CX9g055038 | LOC_Os09g30478 | Os09g0482740 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005195 | 1:30,376,704-30,378,321 | - | C1H1g26715 | C2H1g28126 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| CX1g004717 | 1:30,378,524-30,379,937 | + | C1H1g18258 | - | LOC_Os01g59070 | Os01g0805100 | - | Detail |
| CX1g000028 | 1:30,381,261-30,382,293 | - | C1H1g02848 | C2H1g18483 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| CX1g002341 | 1:30,382,539-30,383,611 | + | - | - | LOC_Os01g59090 | Os01g0805300 | - | Detail |
| CX1g000520 | 1:30,384,832-30,387,928 | + | C1H1g13654 | C2H1g25136 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| CX1g005761 | 1:30,389,470-30,390,357 | - | - | C2H1g25416 | - | - | - | Detail |
| CX1g002439 | 1:30,390,567-30,393,045 | + | C1H1g23718 | C2H1g05127 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| CX1g004982 | 1:30,393,755-30,396,375 | - | C1H1g31482 | C2H1g05794 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| CX1g001600 | 1:30,397,863-30,402,806 | - | C1H1g30942 | C2H1g03484 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| CX1g003257 | 1:30,403,329-30,403,652 | + | - | - | - | - | - | Detail |
| CX1g000155 | 1:30,407,262-30,408,908 | - | C1H1g01953 | C2H1g17768 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| CX1g003536 | 1:30,410,412-30,413,800 | + | C1H1g21118 | C2H1g29760 | LOC_Os01g59150 | Os01g0805900 | Ostub16, OsTUB4 | Detail |
| CX1g005787 | 1:30,415,380-30,418,856 | - | C1H1g01747 | C2H1g23296 | LOC_Os01g59160 | Os01g0806000 | - | Detail |
| CX1g001223 | 1:30,421,887-30,425,480 | - | C1H1g27652 | C2H1g17900 | LOC_Os01g59180 | Os01g0806200 | - | Detail |
| CX1g006087 | 1:30,436,124-30,436,741 | - | - | - | - | - | - | Detail |
| CX1g005984 | 1:30,439,895-30,440,854 | + | C1H1g03002 | C2H1g24895 | LOC_Os01g59200 | Os01g0806400 | - | Detail |
| CX1g003314 | 1:30,477,643-30,478,147 | - | C1H1g05644 | C2H1g23457 | LOC_Os01g59320 | - | - | Detail |
| CX1g004461 | 1:30,480,617-30,483,949 | - | C1H1g24472 | C2H1g08239 | LOC_Os01g72390 | Os01g0807800 | - | Detail |
| CX1g004494 | 1:30,486,118-30,489,955 | + | C1H1g24133 | C2H1g05117 | LOC_Os01g59340 | Os01g0807900 | - | Detail |
| CX1g003387 | 1:30,492,208-30,497,631 | - | C1H1g17602 | C2H1g04858 | LOC_Os01g59350 | Os01g0808100 | OsTGA2 | Detail |