| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05932 | 5:924,833-928,799 | - | C2H5g20475 | CX5g039871 | LOC_Os05g02820 | Os05g0119700 | - | Detail |
| C1H5g25594 | 5:943,281-945,395 | - | C2H5g27318 | CX5g040974 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| C1H5g31585 | 5:977,467-982,443 | + | C2H5g09848 | CX5g037865 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| C1H5g20255 | 5:985,138-986,734 | + | C2H5g03610 | CX5g040092 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| C1H5g25679 | 5:997,164-998,437 | + | C2H5g24004 | CX5g038448 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| C1H5g01702 | 5:1,001,069-1,008,762 | + | C2H5g03745 | CX5g038251 | - | Os05g0121100 | - | Detail |
| C1H5g21915 | 5:1,012,216-1,016,443 | - | C2H5g13518 | CX5g038381 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| C1H5g23502 | 5:1,017,735-1,022,979 | + | C2H5g27724 | CX5g037956 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| C1H5g18884 | 5:1,030,945-1,035,254 | - | C2H5g29033 | CX5g038220 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C1H5g22491 | 5:1,060,140-1,064,909 | - | C2H5g03539 | CX5g039481 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| C1H5g25689 | 5:1,071,694-1,075,687 | + | C2H5g07687 | CX5g038840 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| C1H5g18041 | 5:1,075,746-1,077,506 | - | C2H5g05750 | CX5g041093 | LOC_Os05g03070 | Os05g0121900 | - | Detail |
| C1H5g13312 | 5:1,086,909-1,095,059 | + | C2H5g19920 | CX5g040056 | LOC_Os05g03100 | Os05g0122400 | - | Detail |
| C1H5g19743 | 5:1,095,083-1,096,561 | - | C2H5g29150 | CX5g040504 | LOC_Os05g03110 | Os05g0122500 | - | Detail |
| C1H5g02473 | 5:1,104,967-1,108,773 | + | C2H5g04039 | CX5g037677 | LOC_Os05g03120 | Os05g0122600 | - | Detail |
| C1H5g18506 | 5:1,109,543-1,109,884 | - | C2H5g14986 | CX3g026690 | LOC_Os05g03130 | Os05g0122700 | - | Detail |
| C1H5g28175 | 5:1,120,308-1,124,274 | + | C2H5g02194 | CX5g039466 | LOC_Os05g03140 | Os05g0122800 | - | Detail |
| C1H5g12318 | 5:1,125,348-1,127,698 | - | C2H5g07267 | CX5g037843 | LOC_Os05g03150 | Os05g0122900 | OsBLE1 | Detail |
| C1H5g28350 | 5:1,132,427-1,132,855 | - | C2H5g27198 | CX5g040830 | LOC_Os05g03160 | Os05g0123000 | - | Detail |
| C1H5g07212 | 5:1,132,902-1,133,171 | - | C2H5g14651 | CX5g040717 | LOC_Os05g07270 | Os05g0417000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005195 | 1:30,376,704-30,378,321 | - | C1H1g26715 | C2H1g28126 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| CX1g004717 | 1:30,378,524-30,379,937 | + | C1H1g18258 | - | LOC_Os01g59070 | Os01g0805100 | - | Detail |
| CX1g000028 | 1:30,381,261-30,382,293 | - | C1H1g02848 | C2H1g18483 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| CX1g002341 | 1:30,382,539-30,383,611 | + | - | - | LOC_Os01g59090 | Os01g0805300 | - | Detail |
| CX1g000520 | 1:30,384,832-30,387,928 | + | C1H1g13654 | C2H1g25136 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| CX1g005761 | 1:30,389,470-30,390,357 | - | - | C2H1g25416 | - | - | - | Detail |
| CX1g002439 | 1:30,390,567-30,393,045 | + | C1H1g23718 | C2H1g05127 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| CX1g004982 | 1:30,393,755-30,396,375 | - | C1H1g31482 | C2H1g05794 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| CX1g001600 | 1:30,397,863-30,402,806 | - | C1H1g30942 | C2H1g03484 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| CX1g003257 | 1:30,403,329-30,403,652 | + | - | - | - | - | - | Detail |
| CX1g000155 | 1:30,407,262-30,408,908 | - | C1H1g01953 | C2H1g17768 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| CX1g003536 | 1:30,410,412-30,413,800 | + | C1H1g21118 | C2H1g29760 | LOC_Os01g59150 | Os01g0805900 | Ostub16, OsTUB4 | Detail |
| CX1g005787 | 1:30,415,380-30,418,856 | - | C1H1g01747 | C2H1g23296 | LOC_Os01g59160 | Os01g0806000 | - | Detail |
| CX1g001223 | 1:30,421,887-30,425,480 | - | C1H1g27652 | C2H1g17900 | LOC_Os01g59180 | Os01g0806200 | - | Detail |
| CX1g006087 | 1:30,436,124-30,436,741 | - | - | - | - | - | - | Detail |
| CX1g005984 | 1:30,439,895-30,440,854 | + | C1H1g03002 | C2H1g24895 | LOC_Os01g59200 | Os01g0806400 | - | Detail |
| CX1g003314 | 1:30,477,643-30,478,147 | - | C1H1g05644 | C2H1g23457 | LOC_Os01g59320 | - | - | Detail |
| CX1g004461 | 1:30,480,617-30,483,949 | - | C1H1g24472 | C2H1g08239 | LOC_Os01g72390 | Os01g0807800 | - | Detail |
| CX1g004494 | 1:30,486,118-30,489,955 | + | C1H1g24133 | C2H1g05117 | LOC_Os01g59340 | Os01g0807900 | - | Detail |
| CX1g003387 | 1:30,492,208-30,497,631 | - | C1H1g17602 | C2H1g04858 | LOC_Os01g59350 | Os01g0808100 | OsTGA2 | Detail |