| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05791 | 2:29,312,727-29,318,506 | + | C2H2g01003 | CX2g019523 | LOC_Os02g52340 | Os02g0761000 | OsMADS22 | Detail |
| C1H2g08434 | 2:29,322,664-29,326,512 | + | C2H2g29434 | CX2g020420 | LOC_Os02g52360 | Os02g0761100 | - | Detail |
| C1H2g05177 | 2:29,327,293-29,330,629 | - | C2H2g03547 | CX2g022567 | LOC_Os02g52370 | Os02g0761200 | - | Detail |
| C1H2g24424 | 2:29,337,174-29,344,370 | + | C2H2g23284 | CX2g024166 | LOC_Os02g52390 | Os02g0761400 | - | Detail |
| C1H2g28697 | 2:29,346,278-29,349,162 | - | C2H2g11036 | CX2g023443 | LOC_Os02g52410 | Os02g0761600 | - | Detail |
| C1H2g22121 | 2:29,350,238-29,354,480 | - | C2H2g07632 | CX2g023652 | - | Os02g0761700 | - | Detail |
| C1H2g29643 | 2:29,367,517-29,370,525 | - | C2H2g21732 | CX2g024296 | LOC_Os02g52460 | Os02g0762200 | - | Detail |
| C1H2g11756 | 2:29,372,254-29,375,110 | - | C2H2g01308 | CX2g023185 | LOC_Os02g52470 | Os02g0762300 | - | Detail |
| C1H2g24237 | 2:29,391,213-29,392,967 | + | C2H2g06482 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C1H2g04159 | 2:29,405,081-29,413,827 | - | C2H2g29446 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C1H2g10187 | 2:29,420,753-29,421,443 | + | C2H2g11954 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C1H2g21759 | 2:29,433,020-29,433,551 | + | C2H2g00538 | - | - | - | - | Detail |
| C1H2g09761 | 2:29,436,601-29,439,828 | + | C2H2g18956 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C1H2g15844 | 2:29,440,568-29,443,936 | + | C2H2g03175 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C1H2g15324 | 2:29,444,183-29,445,478 | + | C2H2g23310 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C1H2g26295 | 2:29,446,855-29,449,995 | + | C2H2g02605 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C1H2g14291 | 2:29,453,223-29,455,812 | + | C2H2g18172 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C1H2g16896 | 2:29,459,889-29,462,320 | + | C2H2g07475 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C1H2g16728 | 2:29,462,612-29,464,435 | - | C2H2g26785 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C1H2g10581 | 2:29,482,588-29,484,166 | + | C2H2g26543 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005195 | 1:30,376,704-30,378,321 | - | C1H1g26715 | C2H1g28126 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| CX1g004717 | 1:30,378,524-30,379,937 | + | C1H1g18258 | - | LOC_Os01g59070 | Os01g0805100 | - | Detail |
| CX1g000028 | 1:30,381,261-30,382,293 | - | C1H1g02848 | C2H1g18483 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| CX1g002341 | 1:30,382,539-30,383,611 | + | - | - | LOC_Os01g59090 | Os01g0805300 | - | Detail |
| CX1g000520 | 1:30,384,832-30,387,928 | + | C1H1g13654 | C2H1g25136 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| CX1g005761 | 1:30,389,470-30,390,357 | - | - | C2H1g25416 | - | - | - | Detail |
| CX1g002439 | 1:30,390,567-30,393,045 | + | C1H1g23718 | C2H1g05127 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| CX1g004982 | 1:30,393,755-30,396,375 | - | C1H1g31482 | C2H1g05794 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| CX1g001600 | 1:30,397,863-30,402,806 | - | C1H1g30942 | C2H1g03484 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| CX1g003257 | 1:30,403,329-30,403,652 | + | - | - | - | - | - | Detail |
| CX1g000155 | 1:30,407,262-30,408,908 | - | C1H1g01953 | C2H1g17768 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| CX1g003536 | 1:30,410,412-30,413,800 | + | C1H1g21118 | C2H1g29760 | LOC_Os01g59150 | Os01g0805900 | Ostub16, OsTUB4 | Detail |
| CX1g005787 | 1:30,415,380-30,418,856 | - | C1H1g01747 | C2H1g23296 | LOC_Os01g59160 | Os01g0806000 | - | Detail |
| CX1g001223 | 1:30,421,887-30,425,480 | - | C1H1g27652 | C2H1g17900 | LOC_Os01g59180 | Os01g0806200 | - | Detail |
| CX1g006087 | 1:30,436,124-30,436,741 | - | - | - | - | - | - | Detail |
| CX1g005984 | 1:30,439,895-30,440,854 | + | C1H1g03002 | C2H1g24895 | LOC_Os01g59200 | Os01g0806400 | - | Detail |
| CX1g003314 | 1:30,477,643-30,478,147 | - | C1H1g05644 | C2H1g23457 | LOC_Os01g59320 | - | - | Detail |
| CX1g004461 | 1:30,480,617-30,483,949 | - | C1H1g24472 | C2H1g08239 | LOC_Os01g72390 | Os01g0807800 | - | Detail |
| CX1g004494 | 1:30,486,118-30,489,955 | + | C1H1g24133 | C2H1g05117 | LOC_Os01g59340 | Os01g0807900 | - | Detail |
| CX1g003387 | 1:30,492,208-30,497,631 | - | C1H1g17602 | C2H1g04858 | LOC_Os01g59350 | Os01g0808100 | OsTGA2 | Detail |