| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g23110 | 12:2,163,126-2,165,646 | + | C2H3g00532 | - | - | - | - | Detail |
| C1H12g00004 | 12:2,167,334-2,170,314 | + | C2H12g07258 | CX12g017200 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| C1H12g27513 | 12:2,197,989-2,198,425 | + | C2H12g29923 | CX12g018143 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| C1H12g14632 | 12:2,223,473-2,235,536 | - | C2H12g11473 | CX12g015934 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| C1H12g24063 | 12:2,242,369-2,247,718 | + | C2H12g12632 | CX12g016883 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| C1H12g15447 | 12:2,248,546-2,250,167 | - | C2H12g01567 | CX12g015209 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| C1H12g30747 | 12:2,263,488-2,266,200 | + | C2H12g09179 | CX12g016510 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| C1H12g27311 | 12:2,272,260-2,272,586 | - | C2H12g13534 | CX12g017610 | LOC_Os12g05370 | Os11g0150450 | - | Detail |
| C1H12g27756 | 12:2,284,063-2,288,323 | + | C2H12g10982 | CX12g016333 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| C1H12g08261 | 12:2,292,337-2,293,596 | + | C2H12g22641 | CX12g018469 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| C1H12g16772 | 12:2,293,810-2,297,472 | - | C2H12g14618 | CX12g015371 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| C1H12g16085 | 12:2,340,148-2,341,871 | - | C2H12g10067 | CX12g018115 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| C1H12g07376 | 12:2,349,637-2,352,374 | + | C2H12g10170 | CX12g016582 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| C1H12g16450 | 12:2,365,383-2,372,118 | + | C2H12g01016 | - | - | Os12g0151900 | - | Detail |
| C1H12g08468 | 12:2,366,545-2,367,503 | - | C2H12g20148 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C1H12g07729 | 12:2,373,440-2,375,234 | + | C2H12g12457 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C1H12g30150 | 12:2,390,811-2,391,824 | + | C2H12g13362 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C1H12g00663 | 12:2,395,162-2,397,324 | - | C2H12g01708 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C1H12g14242 | 12:2,398,304-2,402,880 | - | C2H12g04327 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C1H12g29017 | 12:2,409,864-2,414,637 | + | C2H12g22774 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005195 | 1:30,376,704-30,378,321 | - | C1H1g26715 | C2H1g28126 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| CX1g004717 | 1:30,378,524-30,379,937 | + | C1H1g18258 | - | LOC_Os01g59070 | Os01g0805100 | - | Detail |
| CX1g000028 | 1:30,381,261-30,382,293 | - | C1H1g02848 | C2H1g18483 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| CX1g002341 | 1:30,382,539-30,383,611 | + | - | - | LOC_Os01g59090 | Os01g0805300 | - | Detail |
| CX1g000520 | 1:30,384,832-30,387,928 | + | C1H1g13654 | C2H1g25136 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| CX1g005761 | 1:30,389,470-30,390,357 | - | - | C2H1g25416 | - | - | - | Detail |
| CX1g002439 | 1:30,390,567-30,393,045 | + | C1H1g23718 | C2H1g05127 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| CX1g004982 | 1:30,393,755-30,396,375 | - | C1H1g31482 | C2H1g05794 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| CX1g001600 | 1:30,397,863-30,402,806 | - | C1H1g30942 | C2H1g03484 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| CX1g003257 | 1:30,403,329-30,403,652 | + | - | - | - | - | - | Detail |
| CX1g000155 | 1:30,407,262-30,408,908 | - | C1H1g01953 | C2H1g17768 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| CX1g003536 | 1:30,410,412-30,413,800 | + | C1H1g21118 | C2H1g29760 | LOC_Os01g59150 | Os01g0805900 | Ostub16, OsTUB4 | Detail |
| CX1g005787 | 1:30,415,380-30,418,856 | - | C1H1g01747 | C2H1g23296 | LOC_Os01g59160 | Os01g0806000 | - | Detail |
| CX1g001223 | 1:30,421,887-30,425,480 | - | C1H1g27652 | C2H1g17900 | LOC_Os01g59180 | Os01g0806200 | - | Detail |
| CX1g006087 | 1:30,436,124-30,436,741 | - | - | - | - | - | - | Detail |
| CX1g005984 | 1:30,439,895-30,440,854 | + | C1H1g03002 | C2H1g24895 | LOC_Os01g59200 | Os01g0806400 | - | Detail |
| CX1g003314 | 1:30,477,643-30,478,147 | - | C1H1g05644 | C2H1g23457 | LOC_Os01g59320 | - | - | Detail |
| CX1g004461 | 1:30,480,617-30,483,949 | - | C1H1g24472 | C2H1g08239 | LOC_Os01g72390 | Os01g0807800 | - | Detail |
| CX1g004494 | 1:30,486,118-30,489,955 | + | C1H1g24133 | C2H1g05117 | LOC_Os01g59340 | Os01g0807900 | - | Detail |
| CX1g003387 | 1:30,492,208-30,497,631 | - | C1H1g17602 | C2H1g04858 | LOC_Os01g59350 | Os01g0808100 | OsTGA2 | Detail |