| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g30168 | 1:28,289,444-28,299,703 | - | C1H1g02918 | CX1g003911 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| C2H1g05126 | 1:28,304,985-28,308,924 | + | C1H1g08295 | CX1g003221 | LOC_Os01g55190 | Os01g0756600 | - | Detail |
| C2H1g22597 | 1:28,318,179-28,320,472 | + | C1H1g21813 | CX1g002081 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| C2H1g23299 | 1:28,338,570-28,340,635 | + | C1H1g15032 | CX1g004140 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| C2H1g18562 | 1:28,350,390-28,354,778 | + | C1H1g13228 | CX1g001542 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| C2H1g15915 | 1:28,355,293-28,358,083 | - | C1H1g20677 | CX1g000631 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| C2H1g24400 | 1:28,364,442-28,366,634 | - | C1H1g01435 | CX1g004257 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| C2H1g24899 | 1:28,374,828-28,378,687 | - | C1H1g01756 | CX1g006495 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| C2H1g22215 | 1:28,378,797-28,384,540 | + | C1H1g09106 | CX1g003762 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| C2H1g22679 | 1:28,384,600-28,387,735 | - | C1H1g06019 | CX1g005426 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| C2H1g13025 | 1:28,389,007-28,389,551 | - | C1H1g04207 | CX1g002989 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| C2H1g30086 | 1:28,407,994-28,413,990 | - | C1H1g13262 | CX1g006023 | LOC_Os01g55350 | Os01g0758300 | - | Detail |
| C2H1g17375 | 1:28,418,167-28,425,943 | - | - | - | - | - | - | Detail |
| C2H1g29396 | 1:28,473,173-28,476,145 | + | C1H1g00696 | CX1g004565 | LOC_Os01g55410 | Os01g0758900 | - | Detail |
| C2H1g14233 | 1:28,482,003-28,482,901 | + | C1H1g24935 | CX1g005946 | LOC_Os01g55420 | Os01g0759000 | - | Detail |
| C2H1g23330 | 1:28,483,746-28,485,982 | - | C1H1g27055 | CX1g002012 | LOC_Os01g55430 | Os01g0759100 | - | Detail |
| C2H1g17948 | 1:28,489,485-28,490,378 | + | C1H1g18342 | CX1g006544 | - | Os01g0159000 | OsDOG1L-1 | Detail |
| C2H1g19008 | 1:28,499,891-28,504,941 | - | C1H1g03820 | CX1g003443 | LOC_Os01g55450 | Os01g0759400 | - | Detail |
| C2H1g00211 | 1:28,513,090-28,517,518 | + | C1H1g27932 | CX1g002187 | LOC_Os01g55490 | Os01g0759700 | - | Detail |
| C2H1g11945 | 1:28,519,831-28,523,993 | + | C1H1g25715 | CX1g003122 | LOC_Os01g55500 | Os01g0759900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056198 | 9:13,478,924-13,479,079 | - | C1H9g23747 | - | LOC_Os09g25860 | Os09g0427125 | - | Detail |
| CX9g055895 | 9:13,480,428-13,480,866 | + | - | - | LOC_Os09g25865 | Os09g0427100 | - | Detail |
| CX9g056367 | 9:13,491,435-13,494,286 | + | C1H9g21647 | C2H9g25512 | LOC_Os09g25890 | Os09g0427800 | - | Detail |
| CX9g057126 | 9:13,503,486-13,505,950 | - | C1H9g06592 | C2H9g23436 | LOC_Os09g25900 | Os09g0428000 | OsCSLC2 | Detail |
| CX9g055528 | 9:13,511,517-13,511,687 | - | - | - | - | - | - | Detail |
| CX9g057147 | 9:13,574,582-13,588,721 | - | C1H9g21920 | C2H9g23326 | LOC_Os09g25990 | Os09g0429400 | - | Detail |
| CX9g055322 | 9:13,604,175-13,604,384 | + | - | - | - | - | - | Detail |
| CX9g058048 | 9:13,624,037-13,624,387 | + | C1H9g25608 | - | LOC_Os09g26100 | Os09g0430600 | - | Detail |
| CX9g056885 | 9:13,638,890-13,639,330 | - | - | - | - | - | - | Detail |
| CX9g056719 | 9:13,639,611-13,639,901 | - | - | - | - | - | - | Detail |
| CX9g057801 | 9:13,656,276-13,667,060 | + | C1H9g02010 | C2H9g06468 | LOC_Os09g26144 | Os09g0431100 | - | Detail |
| CX9g056520 | 9:13,670,747-13,675,095 | + | C1H9g27927 | C2H9g12498 | LOC_Os09g26160 | Os09g0431200 | OsGLR9.8 | Detail |
| CX9g057258 | 9:13,676,013-13,677,353 | - | C1H9g29049 | C2H9g14183 | LOC_Os09g26170 | Os09g0431300 | Os2R_MYB84 | Detail |
| CX9g057406 | 9:13,686,765-13,689,400 | - | C1H9g29882 | C2H9g01441 | LOC_Os09g26180 | Os09g0431500 | - | Detail |
| CX9g057888 | 9:13,695,003-13,703,857 | + | C1H9g05545 | C2H9g20772 | LOC_Os09g26190 | Os09g0431600 | - | Detail |
| CX9g056629 | 9:13,713,935-13,714,342 | - | C1H9g25327 | - | LOC_Os09g26200 | Os09g0431750 | - | Detail |
| CX9g057666 | 9:13,734,335-13,734,820 | - | C1H9g29816 | - | LOC_Os09g26210 | Os09g0431900 | - | Detail |
| CX9g055810 | 9:13,736,252-13,736,428 | + | - | - | - | - | - | Detail |
| CX9g057738 | 9:13,745,606-13,746,155 | - | C1H9g17725 | C2H1g14512 | LOC_Os11g30820 | Os11g0485000 | - | Detail |
| CX9g058095 | 9:13,746,323-13,746,532 | - | C1H9g17725 | C2H1g14512 | LOC_Os11g29470 | Os11g0485000 | - | Detail |