| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30409 | 6:18,342,460-18,351,804 | + | C2H6g09581 | CX6g044312 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| C1H6g12887 | 6:18,352,318-18,365,457 | - | C2H6g20811 | CX6g044731 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| C1H6g18940 | 6:18,379,612-18,383,047 | + | C2H6g19558 | CX6g045470 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| C1H6g27356 | 6:18,383,853-18,387,163 | - | C2H6g01553 | CX6g041699 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| C1H6g25734 | 6:18,396,642-18,399,434 | - | C2H6g08197 | CX6g045859 | LOC_Os04g55280 | Os04g0646000 | - | Detail |
| C1H6g05986 | 6:18,400,477-18,401,920 | - | C2H6g02285 | CX6g041977 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| C1H6g09123 | 6:18,421,362-18,430,205 | + | C2H6g03125 | CX6g044183 | LOC_Os06g36180 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g31088 | 6:18,451,454-18,455,209 | + | C2H6g24860 | CX6g044183 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g04383 | 6:18,455,547-18,456,599 | + | C2H6g20565 | CX6g042707 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g20721 | 6:18,459,013-18,463,635 | - | C2H6g04951 | CX6g043932 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g19530 | 6:18,464,830-18,470,493 | - | C2H6g00925 | CX6g043875 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g25463 | 6:18,477,053-18,477,663 | + | C2H6g03428 | CX6g045462 | LOC_Os06g36240 | Os06g0556600 | - | Detail |
| C1H6g05440 | 6:18,500,814-18,502,005 | - | C2H6g00804 | - | - | - | - | Detail |
| C1H6g14762 | 6:18,521,513-18,526,151 | + | C2H6g20088 | CX6g045760 | LOC_Os06g36270 | Os06g0557100 | - | Detail |
| C1H6g25128 | 6:18,567,862-18,568,770 | + | C2H6g28947 | CX6g045760 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g06230 | 6:18,575,227-18,575,826 | + | C2H6g11791 | CX6g042210 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g05685 | 6:18,630,560-18,637,243 | - | C2H6g27740 | CX6g043607 | LOC_Os06g36360 | Os06g0558766 | - | Detail |
| C1H6g20753 | 6:18,660,671-18,661,952 | + | C2H6g07116 | CX6g041768 | LOC_Os06g36390 | Os06g0559400 | - | Detail |
| C1H6g11485 | 6:18,662,491-18,665,569 | - | C2H6g12142 | CX6g043353 | LOC_Os06g36400 | Os06g0559500 | - | Detail |
| C1H6g21786 | 6:18,671,291-18,673,620 | - | C2H6g13654 | CX6g043474 | LOC_Os06g36450 | Os06g0560000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056198 | 9:13,478,924-13,479,079 | - | C1H9g23747 | - | LOC_Os09g25860 | Os09g0427125 | - | Detail |
| CX9g055895 | 9:13,480,428-13,480,866 | + | - | - | LOC_Os09g25865 | Os09g0427100 | - | Detail |
| CX9g056367 | 9:13,491,435-13,494,286 | + | C1H9g21647 | C2H9g25512 | LOC_Os09g25890 | Os09g0427800 | - | Detail |
| CX9g057126 | 9:13,503,486-13,505,950 | - | C1H9g06592 | C2H9g23436 | LOC_Os09g25900 | Os09g0428000 | OsCSLC2 | Detail |
| CX9g055528 | 9:13,511,517-13,511,687 | - | - | - | - | - | - | Detail |
| CX9g057147 | 9:13,574,582-13,588,721 | - | C1H9g21920 | C2H9g23326 | LOC_Os09g25990 | Os09g0429400 | - | Detail |
| CX9g055322 | 9:13,604,175-13,604,384 | + | - | - | - | - | - | Detail |
| CX9g058048 | 9:13,624,037-13,624,387 | + | C1H9g25608 | - | LOC_Os09g26100 | Os09g0430600 | - | Detail |
| CX9g056885 | 9:13,638,890-13,639,330 | - | - | - | - | - | - | Detail |
| CX9g056719 | 9:13,639,611-13,639,901 | - | - | - | - | - | - | Detail |
| CX9g057801 | 9:13,656,276-13,667,060 | + | C1H9g02010 | C2H9g06468 | LOC_Os09g26144 | Os09g0431100 | - | Detail |
| CX9g056520 | 9:13,670,747-13,675,095 | + | C1H9g27927 | C2H9g12498 | LOC_Os09g26160 | Os09g0431200 | OsGLR9.8 | Detail |
| CX9g057258 | 9:13,676,013-13,677,353 | - | C1H9g29049 | C2H9g14183 | LOC_Os09g26170 | Os09g0431300 | Os2R_MYB84 | Detail |
| CX9g057406 | 9:13,686,765-13,689,400 | - | C1H9g29882 | C2H9g01441 | LOC_Os09g26180 | Os09g0431500 | - | Detail |
| CX9g057888 | 9:13,695,003-13,703,857 | + | C1H9g05545 | C2H9g20772 | LOC_Os09g26190 | Os09g0431600 | - | Detail |
| CX9g056629 | 9:13,713,935-13,714,342 | - | C1H9g25327 | - | LOC_Os09g26200 | Os09g0431750 | - | Detail |
| CX9g057666 | 9:13,734,335-13,734,820 | - | C1H9g29816 | - | LOC_Os09g26210 | Os09g0431900 | - | Detail |
| CX9g055810 | 9:13,736,252-13,736,428 | + | - | - | - | - | - | Detail |
| CX9g057738 | 9:13,745,606-13,746,155 | - | C1H9g17725 | C2H1g14512 | LOC_Os11g30820 | Os11g0485000 | - | Detail |
| CX9g058095 | 9:13,746,323-13,746,532 | - | C1H9g17725 | C2H1g14512 | LOC_Os11g29470 | Os11g0485000 | - | Detail |