| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g20628 | 12:4,940,952-4,944,703 | + | C2H12g03231 | CX12g017375 | LOC_Os12g10540 | Os12g0207000 | OsMADS13 | Detail |
| C1H12g06590 | 12:4,945,861-4,948,546 | + | C2H12g03303 | CX12g017375 | LOC_Os12g10550 | Os12g0207200 | - | Detail |
| C1H12g28035 | 12:4,951,596-4,955,498 | + | C2H12g11349 | CX12g016297 | LOC_Os12g10560 | Os12g0207300 | - | Detail |
| C1H12g14134 | 12:4,975,389-4,979,855 | - | C2H12g00454 | CX12g016832 | LOC_Os12g10640 | Os12g0209000 | - | Detail |
| C1H12g20126 | 12:4,985,183-4,987,190 | + | C2H12g03167 | CX12g017848 | LOC_Os12g10650 | Os12g0209100 | - | Detail |
| C1H12g08359 | 12:4,990,938-4,993,329 | + | C2H12g07296 | CX12g018182 | LOC_Os12g10660 | Os12g0209200 | - | Detail |
| C1H12g26070 | 12:4,993,918-5,004,307 | - | C2H12g07494 | CX12g016116 | LOC_Os12g10670 | Os12g0209300 | - | Detail |
| C1H12g25584 | 12:5,025,337-5,033,174 | + | C2H12g24281 | CX12g016275 | LOC_Os12g10700 | Os12g0209700 | - | Detail |
| C1H12g04109 | 12:5,034,044-5,045,982 | - | C2H12g16222 | CX12g015857 | LOC_Os12g10710 | Os12g0209800 | - | Detail |
| C1H12g13966 | 12:5,051,713-5,056,129 | + | C2H12g11181 | CX12g015356 | LOC_Os12g10720 | Os12g0210200 | OsGSTZ1 | Detail |
| C1H12g14959 | 12:5,059,753-5,063,010 | + | C2H12g23052 | CX12g017934 | LOC_Os12g10730 | Os12g0210300 | OsGSTZ2 | Detail |
| C1H12g28216 | 12:5,065,151-5,072,012 | + | C2H12g22614 | CX12g018439 | LOC_Os12g10740 | Os12g0210400 | RIR1 | Detail |
| C1H12g23522 | 12:5,074,652-5,075,945 | - | C2H12g18765 | CX12g018505 | LOC_Os12g10750 | Os12g0210500 | - | Detail |
| C1H12g11850 | 12:5,097,831-5,104,042 | + | C2H12g01604 | CX12g015352 | LOC_Os12g10784 | Os12g0210800 | - | Detail |
| C1H12g04913 | 12:5,106,938-5,107,282 | + | C2H12g24648 | CX12g017407 | LOC_Os12g10820 | Os12g0211000 | - | Detail |
| C1H12g12212 | 12:5,107,774-5,109,806 | + | C2H12g26558 | CX12g017407 | LOC_Os12g10810 | Os12g0211000 | - | Detail |
| C1H12g22331 | 12:5,116,136-5,119,136 | + | C2H12g10269 | CX12g017438 | LOC_Os12g10910 | Os12g0211400 | - | Detail |
| C1H12g03623 | 12:5,121,392-5,121,862 | - | C2H12g12998 | CX12g015302 | LOC_Os12g11930 | Os12g0211500 | - | Detail |
| C1H12g08850 | 12:5,122,421-5,125,468 | - | C2H12g02157 | CX12g015441 | LOC_Os12g11930 | Os12g0215950 | - | Detail |
| C1H12g16830 | 12:5,236,409-5,240,672 | + | C2H12g01684 | - | - | Os12g0216000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055694 | 9:13,152,978-13,154,418 | + | C1H9g24531 | C2H9g25913 | LOC_Os09g25220 | Os09g0420000 | - | Detail |
| CX9g055124 | 9:13,160,972-13,161,277 | - | - | - | - | - | - | Detail |
| CX9g055351 | 9:13,168,494-13,172,244 | - | C1H9g21007 | C2H9g28714 | LOC_Os09g25290 | Os09g0420300 | - | Detail |
| CX9g056780 | 9:13,177,416-13,179,819 | - | C1H9g28851 | C2H9g04494 | LOC_Os09g25310 | Os09g0420600 | - | Detail |
| CX9g056019 | 9:13,181,363-13,181,584 | + | C1H9g13617 | C2H9g25576 | LOC_Os09g25314 | Os09g0420700 | - | Detail |
| CX9g058181 | 9:13,186,350-13,191,365 | - | C1H9g09470 | C2H9g18572 | LOC_Os09g25330 | Os09g0420900 | - | Detail |
| CX9g054855 | 9:13,201,606-13,201,767 | - | - | - | - | - | - | Detail |
| CX9g055908 | 9:13,208,198-13,211,676 | - | C1H9g26024 | C2H9g09588 | LOC_Os09g25370 | Os09g0421100 | - | Detail |
| CX9g057078 | 9:13,212,697-13,226,589 | - | C1H9g02641 | C2H9g10962 | LOC_Os09g25380 | Os09g0421200 | - | Detail |
| CX9g056194 | 9:13,227,842-13,231,623 | - | C1H9g29866 | C2H9g17055 | LOC_Os09g25390 | Os09g0421300 | - | Detail |
| CX9g054998 | 9:13,235,832-13,237,066 | + | C1H9g17171 | C2H9g14095 | LOC_Os09g25410 | Os09g0421500 | - | Detail |
| CX9g055874 | 9:13,237,749-13,240,037 | - | C1H9g16363 | C2H9g26024 | LOC_Os09g25420 | Os09g0421600 | - | Detail |
| CX9g057047 | 9:13,242,767-13,243,923 | - | C1H9g13057 | C2H9g20999 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| CX9g057707 | 9:13,246,572-13,248,905 | - | C1H9g23603 | C2H9g15585 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| CX9g057935 | 9:13,252,583-13,257,113 | - | C1H9g04652 | C2H9g18547 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| CX9g057671 | 9:13,259,387-13,259,563 | + | - | - | - | - | - | Detail |
| CX9g055472 | 9:13,267,056-13,267,214 | - | C1H4g20138 | - | - | - | - | Detail |
| CX9g055442 | 9:13,274,170-13,278,293 | + | C1H9g01940 | C2H9g29866 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| CX9g056791 | 9:13,279,462-13,283,020 | - | C1H9g20433 | C2H9g13149 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| CX9g057973 | 9:13,294,507-13,297,865 | + | C1H9g21248 | C2H9g06178 | LOC_Os09g25540 | Os09g0423200 | - | Detail |