| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01892 | 10:10,437,095-10,437,779 | - | C1H10g22659 | - | - | - | - | Detail |
| C2H10g28252 | 10:10,455,310-10,459,721 | + | C1H10g20546 | CX10g008168 | LOC_Os10g21460 | Os10g0358600 | - | Detail |
| C2H10g12273 | 10:10,461,766-10,464,428 | - | C1H10g14022 | CX10g010475 | LOC_Os10g21470 | Os10g0358700 | - | Detail |
| C2H10g29078 | 10:10,474,124-10,476,644 | - | C1H10g29945 | CX10g009930 | LOC_Os10g21490 | - | - | Detail |
| C2H10g02652 | 10:10,488,771-10,489,913 | + | C1H10g16528 | CX10g008439 | LOC_Os10g21540 | Os10g0359200 | - | Detail |
| C2H10g18902 | 10:10,498,404-10,501,797 | - | C1H10g18664 | CX10g009618 | LOC_Os10g21560 | Os10g0359500 | - | Detail |
| C2H10g05637 | 10:10,514,587-10,516,735 | - | C1H10g18874 | CX10g010522 | LOC_Os10g21590 | Os10g0360100 | - | Detail |
| C2H10g27251 | 10:10,521,535-10,522,304 | - | C1H10g17548 | - | - | - | - | Detail |
| C2H10g25817 | 10:10,529,597-10,529,976 | - | C1H10g10032 | - | - | - | - | Detail |
| C2H10g24961 | 10:10,536,850-10,540,537 | + | C1H10g30481 | CX10g007795 | LOC_Os10g21800 | Os10g0360800 | - | Detail |
| C2H10g25330 | 10:10,542,442-10,547,040 | + | - | - | - | - | - | Detail |
| C2H10g16627 | 10:10,543,097-10,546,184 | - | C1H10g19484 | CX10g010771 | LOC_Os10g21660 | - | - | Detail |
| C2H10g16136 | 10:10,557,714-10,558,349 | - | C1H5g20408 | - | - | - | - | Detail |
| C2H10g16733 | 10:10,563,595-10,563,995 | + | - | - | - | - | - | Detail |
| C2H10g30610 | 10:10,564,877-10,565,523 | + | - | - | - | - | - | Detail |
| C2H10g05328 | 10:10,572,798-10,573,292 | + | C1H10g15818 | CX10g007732 | LOC_Os10g21670 | Os10g0361000 | - | Detail |
| C2H10g20812 | 10:10,588,844-10,589,320 | + | C1H10g09092 | CX10g009951 | LOC_Os10g21670 | Os10g0361300 | - | Detail |
| C2H10g05563 | 10:10,600,692-10,601,414 | - | C1H10g28163 | CX10g007540 | - | - | - | Detail |
| C2H10g24548 | 10:10,604,322-10,604,825 | + | C1H10g27379 | CX10g008677 | LOC_Os10g21790 | Os10g0361900 | - | Detail |
| C2H10g01089 | 10:10,609,788-10,621,213 | - | C1H10g20202 | CX10g010859 | LOC_Os10g21810 | Os10g0362300 | HK5, OHK3b, OHK3, HK, OsHK5, Crl3, Ohk3, OsHK2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056556 | 9:12,756,320-12,756,628 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056230 | 9:12,758,248-12,758,508 | + | - | - | - | - | - | Detail |
| CX9g056335 | 9:12,761,140-12,761,504 | - | C1H9g24887 | C2H9g24987 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| CX9g057533 | 9:12,762,363-12,762,524 | + | - | - | - | - | - | Detail |
| CX9g056498 | 9:12,771,284-12,772,702 | + | C1H9g25612 | C2H9g22954 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| CX9g057109 | 9:12,775,095-12,776,606 | + | C1H9g29027 | C2H9g12558 | LOC_Os09g24640 | Os09g0412900 | - | Detail |
| CX9g055582 | 9:12,780,778-12,783,974 | + | C1H9g10917 | C2H9g30609 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| CX9g054861 | 9:12,785,438-12,788,362 | - | C1H9g25606 | C2H9g23813 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| CX9g055611 | 9:12,788,538-12,794,861 | + | C1H9g01483 | C2H9g23311 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| CX9g055527 | 9:12,795,484-12,797,805 | - | C1H9g27670 | C2H9g07064 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| CX9g055730 | 9:12,799,276-12,801,026 | - | C1H9g13850 | C2H9g21107 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| CX9g055962 | 9:12,802,648-12,806,971 | - | C1H9g31189 | C2H9g10108 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| CX9g057257 | 9:12,820,570-12,824,483 | + | C1H9g25839 | C2H9g16912 | LOC_Os09g24710 | Os09g0413700 | - | Detail |
| CX9g055576 | 9:12,847,780-12,848,923 | + | C1H9g16168 | C2H9g05872 | LOC_Os09g24800 | Os09g0414300 | Os2R_MYB83 | Detail |
| CX9g058206 | 9:12,852,130-12,853,218 | + | - | - | - | - | - | Detail |
| CX9g055155 | 9:12,886,687-12,887,598 | + | - | - | - | Os09g0414701 | - | Detail |
| CX9g056434 | 9:12,896,284-12,896,442 | + | - | - | - | - | - | Detail |
| CX9g057784 | 9:12,904,132-12,905,303 | + | C1H9g29440 | C2H9g10070 | LOC_Os09g24840 | Os09g0414900 | - | Detail |
| CX9g056267 | 9:12,928,845-12,931,300 | + | C1H9g06238 | C2H9g25855 | LOC_Os09g24900 | Os09g0415700 | - | Detail |
| CX9g055233 | 9:12,931,952-12,937,542 | - | C1H9g17729 | C2H9g19203 | LOC_Os09g24910 | Os09g0415800 | - | Detail |