| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18264 | 2:22,785,429-22,788,083 | + | C2H2g20688 | CX2g024892 | LOC_Os02g40130 | Os02g0614966 | - | Detail |
| C1H2g30063 | 2:22,792,176-22,795,547 | + | C2H2g24104 | CX2g019718 | LOC_Os02g40180 | Os02g0615400 | - | Detail |
| C1H2g00311 | 2:22,809,258-22,809,955 | + | C2H10g03172 | - | - | - | - | Detail |
| C1H2g05371 | 2:22,812,589-22,816,778 | + | C2H2g27798 | CX2g023917 | LOC_Os02g40240 | Os02g0615800 | - | Detail |
| C1H2g28443 | 2:22,851,233-22,853,939 | - | - | - | - | - | - | Detail |
| C1H2g02395 | 2:22,891,925-22,893,245 | - | C2H2g08455 | CX2g020249 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| C1H2g19871 | 2:22,905,314-22,911,195 | - | C2H2g09185 | CX2g022448 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| C1H2g09487 | 2:22,917,792-22,922,311 | - | C2H2g01683 | - | LOC_Os02g40420 | - | - | Detail |
| C1H2g18153 | 2:22,923,517-22,936,773 | - | C2H2g12073 | CX2g019193 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| C1H2g29661 | 2:22,948,386-22,949,915 | + | C2H2g17921 | CX2g022735 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| C1H2g22026 | 2:22,950,572-22,959,121 | + | C2H2g21511 | CX2g022878 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| C1H2g23006 | 2:22,959,190-22,962,842 | - | C2H2g09254 | CX2g020956 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| C1H2g02429 | 2:22,963,406-22,971,975 | - | C2H2g18815 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C1H2g02028 | 2:22,988,335-22,988,934 | - | - | - | LOC_Os02g53020 | - | - | Detail |
| C1H2g22582 | 2:22,992,141-22,994,350 | + | C2H2g26929 | - | LOC_Os02g40490 | - | - | Detail |
| C1H2g02238 | 2:22,998,546-23,000,240 | + | C2H2g04756 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C1H2g04978 | 2:23,001,507-23,005,434 | + | C2H2g05107 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C1H2g16546 | 2:23,005,880-23,007,215 | - | C2H2g25708 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C1H2g01139 | 2:23,012,056-23,013,639 | - | C2H2g01262 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C1H2g19268 | 2:23,028,666-23,030,167 | + | C2H2g01838 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056556 | 9:12,756,320-12,756,628 | - | C1H12g24303 | C2H9g01644 | LOC_Os09g26790 | - | - | Detail |
| CX9g056230 | 9:12,758,248-12,758,508 | + | - | - | - | - | - | Detail |
| CX9g056335 | 9:12,761,140-12,761,504 | - | C1H9g24887 | C2H9g24987 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| CX9g057533 | 9:12,762,363-12,762,524 | + | - | - | - | - | - | Detail |
| CX9g056498 | 9:12,771,284-12,772,702 | + | C1H9g25612 | C2H9g22954 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| CX9g057109 | 9:12,775,095-12,776,606 | + | C1H9g29027 | C2H9g12558 | LOC_Os09g24640 | Os09g0412900 | - | Detail |
| CX9g055582 | 9:12,780,778-12,783,974 | + | C1H9g10917 | C2H9g30609 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| CX9g054861 | 9:12,785,438-12,788,362 | - | C1H9g25606 | C2H9g23813 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| CX9g055611 | 9:12,788,538-12,794,861 | + | C1H9g01483 | C2H9g23311 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| CX9g055527 | 9:12,795,484-12,797,805 | - | C1H9g27670 | C2H9g07064 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| CX9g055730 | 9:12,799,276-12,801,026 | - | C1H9g13850 | C2H9g21107 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| CX9g055962 | 9:12,802,648-12,806,971 | - | C1H9g31189 | C2H9g10108 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| CX9g057257 | 9:12,820,570-12,824,483 | + | C1H9g25839 | C2H9g16912 | LOC_Os09g24710 | Os09g0413700 | - | Detail |
| CX9g055576 | 9:12,847,780-12,848,923 | + | C1H9g16168 | C2H9g05872 | LOC_Os09g24800 | Os09g0414300 | Os2R_MYB83 | Detail |
| CX9g058206 | 9:12,852,130-12,853,218 | + | - | - | - | - | - | Detail |
| CX9g055155 | 9:12,886,687-12,887,598 | + | - | - | - | Os09g0414701 | - | Detail |
| CX9g056434 | 9:12,896,284-12,896,442 | + | - | - | - | - | - | Detail |
| CX9g057784 | 9:12,904,132-12,905,303 | + | C1H9g29440 | C2H9g10070 | LOC_Os09g24840 | Os09g0414900 | - | Detail |
| CX9g056267 | 9:12,928,845-12,931,300 | + | C1H9g06238 | C2H9g25855 | LOC_Os09g24900 | Os09g0415700 | - | Detail |
| CX9g055233 | 9:12,931,952-12,937,542 | - | C1H9g17729 | C2H9g19203 | LOC_Os09g24910 | Os09g0415800 | - | Detail |