| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07028 | 1:7,996,927-7,997,947 | + | C1H1g09557 | CX1g004307 | LOC_Os01g15800 | - | - | Detail |
| C2H1g02259 | 1:7,998,958-8,000,750 | - | C1H1g21240 | CX1g003830 | LOC_Os01g15810 | Os01g0263000 | - | Detail |
| C2H1g12087 | 1:8,016,183-8,018,406 | + | C1H1g27085 | CX1g006222 | LOC_Os01g15830 | Os01g0263300 | - | Detail |
| C2H1g23581 | 1:8,018,491-8,023,280 | - | C1H1g08776 | CX1g000999 | LOC_Os01g15840 | Os01g0263400 | - | Detail |
| C2H1g15648 | 1:8,023,490-8,028,004 | + | C1H1g08020 | CX1g002687 | LOC_Os01g15850 | Os01g0263500 | - | Detail |
| C2H1g07347 | 1:8,029,359-8,032,436 | + | C1H10g06964 | CX1g002839 | LOC_Os01g15860 | Os01g0263600 | - | Detail |
| C2H1g18028 | 1:8,049,743-8,052,651 | - | C1H1g18015 | CX1g006868 | LOC_Os01g15900 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |
| C2H1g12778 | 1:8,058,826-8,060,840 | + | C1H1g15031 | - | LOC_Os01g15910 | Os01g0264100 | - | Detail |
| C2H1g29466 | 1:8,062,729-8,068,984 | + | C1H1g15031 | - | LOC_Os01g15910 | Os01g0264100 | - | Detail |
| C2H1g18875 | 1:8,082,807-8,083,361 | + | C1H1g15752 | CX1g003610 | LOC_Os01g15970 | Os01g0264400 | - | Detail |
| C2H1g29970 | 1:8,085,220-8,087,374 | + | C1H1g22583 | CX1g005560 | LOC_Os01g15979 | Os01g0264500 | - | Detail |
| C2H1g16351 | 1:8,090,363-8,091,922 | + | C1H1g22583 | CX1g004846 | LOC_Os01g15990 | Os01g0264600 | - | Detail |
| C2H1g04930 | 1:8,097,538-8,101,697 | - | C1H1g00764 | CX1g003410 | LOC_Os01g16000 | Os01g0264700 | OsSec14-1 | Detail |
| C2H1g18047 | 1:8,107,813-8,111,834 | + | C1H1g30463 | CX1g006955 | LOC_Os01g16010 | Os01g0264900 | - | Detail |
| C2H1g05764 | 1:8,112,646-8,114,013 | + | - | CX1g002598 | LOC_Os01g16020 | Os01g0265000 | OsGGR2, LYL2, OsGGRII | Detail |
| C2H1g10976 | 1:8,114,701-8,117,125 | - | C1H1g31421 | CX1g006039 | LOC_Os01g16030 | Os01g0265100 | - | Detail |
| C2H1g02114 | 1:8,120,036-8,123,154 | - | C1H1g11286 | CX1g005747 | LOC_Os01g16040 | Os01g0265200 | OsPAPST1 | Detail |
| C2H1g11487 | 1:8,132,263-8,132,761 | - | - | CX1g007112 | - | - | - | Detail |
| C2H1g21228 | 1:8,133,052-8,135,438 | - | - | CX1g002223 | - | Os01g0265400 | - | Detail |
| C2H1g20365 | 1:8,137,800-8,140,286 | - | C1H1g29094 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000512 | 1:30,210,874-30,212,322 | - | C1H1g17566 | - | LOC_Os01g58620 | Os01g0800300 | - | Detail |
| CX1g001613 | 1:30,213,110-30,214,432 | + | C1H1g01785 | C2H1g02122 | LOC_Os01g58630 | Os01g0800400 | - | Detail |
| CX1g003815 | 1:30,216,764-30,223,723 | + | C1H1g08940 | C2H1g29094 | LOC_Os01g58640 | Os01g0800500 | - | Detail |
| CX1g006207 | 1:30,228,767-30,234,322 | + | C1H1g30117 | C2H1g21131 | LOC_Os01g58660 | Os01g0800800 | - | Detail |
| CX1g004061 | 1:30,235,956-30,236,822 | + | C1H1g09904 | C2H1g01554 | LOC_Os01g58670 | Os01g0800900 | - | Detail |
| CX1g001454 | 1:30,238,013-30,246,066 | + | C1H1g08092 | C2H1g30505 | LOC_Os01g58690 | Os01g0801000 | - | Detail |
| CX1g006739 | 1:30,247,033-30,249,003 | - | C1H1g00385 | C2H1g23744 | LOC_Os01g58700 | Os01g0801200 | - | Detail |
| CX1g005593 | 1:30,258,136-30,260,092 | - | C1H1g19538 | C2H1g07939 | LOC_Os01g58730 | Os01g0801500 | - | Detail |
| CX1g003950 | 1:30,260,973-30,263,857 | - | C1H1g05474 | C2H1g30108 | LOC_Os01g58740 | Os01g0801600 | - | Detail |
| CX1g005695 | 1:30,265,523-30,268,608 | - | C1H1g14045 | C2H1g26051 | LOC_Os01g58750 | Os01g0801700 | OsGCD1 | Detail |
| CX1g006169 | 1:30,268,831-30,269,301 | + | - | - | - | Os01g0801800 | - | Detail |
| CX1g003384 | 1:30,271,082-30,271,612 | + | C1H1g02432 | C2H5g23523 | LOC_Os01g58760 | Os01g0801901 | - | Detail |
| CX1g006547 | 1:30,273,919-30,278,065 | + | C1H1g04999 | C2H1g09112 | LOC_Os01g58780 | Os01g0802000 | - | Detail |
| CX1g000361 | 1:30,278,857-30,283,543 | + | C1H1g01326 | C2H1g24587 | LOC_Os01g58790 | Os01g0802100 | OsIspE, IspE, OsCMK, CMK | Detail |
| CX1g004944 | 1:30,284,172-30,284,618 | - | C1H1g24285 | C2H5g09380 | LOC_Os01g58800 | Os01g0802200 | - | Detail |
| CX1g004781 | 1:30,290,471-30,291,382 | + | C1H1g07782 | C2H5g19411 | LOC_Os01g58850 | Os01g0802600 | - | Detail |
| CX1g002565 | 1:30,297,660-30,299,843 | - | C1H1g15075 | C2H1g08686 | LOC_Os01g58860 | Os01g0802700 | OsPIN9 | Detail |
| CX1g002172 | 1:30,320,624-30,321,405 | + | C1H1g24422 | C2H1g30330 | LOC_Os01g58890 | Os01g0803200 | - | Detail |
| CX1g000223 | 1:30,332,430-30,334,233 | - | C1H1g07293 | C2H1g25597 | LOC_Os01g58910 | Os01g0803300 | - | Detail |
| CX1g006743 | 1:30,335,802-30,335,951 | + | - | - | - | - | - | Detail |