| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11107 | 5:11,284,076-11,287,843 | - | C1H5g18969 | CX5g039364 | LOC_Os05g23610 | Os05g0301600 | OsINH2 | Detail |
| C2H5g30488 | 5:11,299,780-11,304,802 | - | C1H5g13833 | CX5g038383 | LOC_Os05g23600 | Os05g0301500 | - | Detail |
| C2H5g15419 | 5:11,337,068-11,344,288 | - | C1H5g25741 | CX5g039737 | LOC_Os05g23530 | Os05g0300700 | - | Detail |
| C2H5g00677 | 5:11,356,557-11,357,506 | + | C1H5g08150 | CX5g038824 | - | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C2H5g24108 | 5:11,359,892-11,360,796 | + | - | - | - | - | - | Detail |
| C2H5g01000 | 5:11,364,368-11,365,002 | - | - | CX5g039051 | - | - | - | Detail |
| C2H5g13191 | 5:11,386,359-11,388,794 | + | C1H5g23960 | CX5g037400 | LOC_Os05g23470 | Os05g0299700 | - | Detail |
| C2H5g12441 | 5:11,389,339-11,390,546 | - | C1H5g10338 | CX5g039100 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| C2H5g25475 | 5:11,401,218-11,401,442 | - | - | - | - | - | - | Detail |
| C2H5g29124 | 5:11,401,644-11,403,214 | + | C1H5g16907 | CX5g041087 | LOC_Os05g23450 | Os05g0125600 | - | Detail |
| C2H5g22808 | 5:11,405,918-11,413,365 | - | C1H5g10724 | CX5g039100 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| C2H5g10787 | 5:11,423,646-11,429,535 | + | C1H5g22140 | CX5g037270 | LOC_Os05g23430 | Os05g0299300 | - | Detail |
| C2H5g08398 | 5:11,431,276-11,436,314 | + | C1H5g26259 | CX5g037770 | LOC_Os05g23420 | Os05g0299200 | - | Detail |
| C2H5g16507 | 5:11,447,206-11,449,537 | + | C1H5g16206 | CX5g039540 | LOC_Os05g23840 | Os05g0304100 | - | Detail |
| C2H5g25548 | 5:11,453,620-11,458,632 | + | C1H5g08335 | CX5g038810 | LOC_Os05g23860 | Os05g0304400 | OsGDI2 | Detail |
| C2H5g22505 | 5:11,465,467-11,471,525 | + | C1H5g06395 | CX5g039261 | LOC_Os05g23880 | Os05g0304600 | - | Detail |
| C2H5g01064 | 5:11,496,109-11,503,222 | - | C1H5g01632 | CX5g037017 | LOC_Os05g23924 | Os05g0304900 | - | Detail |
| C2H5g30014 | 5:11,515,970-11,525,571 | + | C1H5g22159 | CX5g038283 | LOC_Os05g23940 | Os05g0305100 | - | Detail |
| C2H5g05339 | 5:11,601,443-11,605,240 | + | C1H5g28207 | CX5g037690 | LOC_Os05g23990 | Os05g0305600 | - | Detail |
| C2H5g07432 | 5:11,605,893-11,612,123 | - | C1H5g16715 | CX5g037290 | LOC_Os05g24000 | Os05g0305700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056898 | 9:11,807,759-11,808,127 | - | - | - | - | - | - | Detail |
| CX9g056020 | 9:11,812,802-11,816,824 | + | C1H9g23102 | C2H9g12396 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| CX9g054898 | 9:11,819,159-11,822,416 | + | C1H9g00211 | C2H9g04209 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| CX9g057799 | 9:11,849,884-11,854,901 | + | C1H9g11219 | C2H9g01293 | LOC_Os09g22540 | Os09g0393200 | OsJMJ718 | Detail |
| CX9g058011 | 9:11,867,756-11,867,989 | - | - | - | - | - | - | Detail |
| CX9g057399 | 9:11,879,413-11,886,780 | - | C1H9g30997 | C2H9g12185 | LOC_Os09g23070 | Os09g0394100 | - | Detail |
| CX9g057598 | 9:11,888,143-11,896,407 | - | C1H9g09905 | C2H9g23876 | LOC_Os09g23084 | Os09g0394300 | - | Detail |
| CX9g057002 | 9:11,924,002-11,928,244 | + | C1H9g21012 | C2H9g25736 | LOC_Os09g23110 | Os09g0394500 | OspGlcT3 | Detail |
| CX9g057018 | 9:11,934,518-11,936,751 | - | C1H9g11161 | C2H9g21887 | LOC_Os09g23140 | Os09g0394600 | - | Detail |
| CX9g056382 | 9:11,941,482-11,945,505 | - | C1H9g04354 | C2H9g21887 | LOC_Os09g23150 | Os09g0394700 | - | Detail |
| CX9g056041 | 9:11,951,732-11,956,267 | + | C1H9g07311 | C2H9g12341 | LOC_Os09g23160 | Os09g0394900 | - | Detail |
| CX9g057525 | 9:12,011,224-12,016,975 | + | C1H9g00378 | C2H9g06605 | LOC_Os09g23200 | Os09g0395300 | RL9, rl9, OsADD1 | Detail |
| CX9g056960 | 9:12,033,094-12,034,500 | - | C1H9g06586 | C2H9g01641 | LOC_Os09g23220 | Os09g0395600 | - | Detail |
| CX9g056289 | 9:12,047,087-12,048,607 | + | C1H9g04135 | C2H9g28359 | LOC_Os09g23280 | Os09g0396300 | - | Detail |
| CX9g057914 | 9:12,052,995-12,053,297 | - | C1H9g21323 | - | - | - | - | Detail |
| CX9g058057 | 9:12,071,995-12,072,147 | + | - | - | - | - | - | Detail |
| CX9g055871 | 9:12,075,617-12,076,923 | + | C1H9g25860 | C2H9g19158 | LOC_Os09g23300 | Os09g0396900 | OsVIT2 | Detail |
| CX9g056819 | 9:12,102,540-12,102,722 | - | - | - | - | - | - | Detail |
| CX9g056954 | 9:12,111,119-12,114,018 | + | C1H9g07186 | C2H9g25337 | LOC_Os09g23350 | Os09g0397300 | - | Detail |
| CX9g057642 | 9:12,116,352-12,117,989 | - | C1H9g18089 | C2H9g27674 | LOC_Os09g23360 | Os09g0397400 | - | Detail |