| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g26745 | 9:17,426,590-17,428,151 | + | C1H9g13766 | CX9g055830 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C2H9g10324 | 9:17,436,093-17,439,429 | + | C1H9g13766 | CX9g055265 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C2H9g01691 | 9:17,443,794-17,445,384 | + | C1H9g07362 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C2H9g08969 | 9:17,448,493-17,449,274 | - | C1H9g25049 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C2H9g07509 | 9:17,453,053-17,456,008 | - | C1H9g07553 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C2H9g28114 | 9:17,461,813-17,465,864 | + | C1H9g01949 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C2H9g04300 | 9:17,477,350-17,478,193 | + | C1H9g05805 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C2H9g16123 | 9:17,481,815-17,484,032 | - | C1H9g07637 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C2H9g26896 | 9:17,495,146-17,497,057 | + | C1H9g29475 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C2H9g28773 | 9:17,523,780-17,528,824 | - | C1H9g30526 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C2H9g02120 | 9:17,532,544-17,535,528 | - | C1H9g28769 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C2H9g25877 | 9:17,538,389-17,546,069 | - | C1H9g03629 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| C2H9g23489 | 9:17,546,316-17,549,213 | - | C1H9g19525 | CX9g056579 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| C2H9g27445 | 9:17,549,627-17,553,215 | - | C1H9g27128 | CX9g056877 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| C2H9g23825 | 9:17,555,063-17,558,905 | + | C1H9g05809 | CX9g055906 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| C2H9g28583 | 9:17,566,927-17,570,294 | + | C1H9g07466 | CX9g056800 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| C2H9g03363 | 9:17,570,757-17,573,848 | + | C1H9g12433 | CX9g057922 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| C2H9g23341 | 9:17,581,105-17,582,729 | + | C1H9g17904 | CX9g056469 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| C2H9g22638 | 9:17,584,226-17,593,186 | + | C1H9g17327 | CX9g057701 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| C2H9g01014 | 9:17,593,927-17,596,071 | + | C1H9g09404 | CX9g055918 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056898 | 9:11,807,759-11,808,127 | - | - | - | - | - | - | Detail |
| CX9g056020 | 9:11,812,802-11,816,824 | + | C1H9g23102 | C2H9g12396 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| CX9g054898 | 9:11,819,159-11,822,416 | + | C1H9g00211 | C2H9g04209 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| CX9g057799 | 9:11,849,884-11,854,901 | + | C1H9g11219 | C2H9g01293 | LOC_Os09g22540 | Os09g0393200 | OsJMJ718 | Detail |
| CX9g058011 | 9:11,867,756-11,867,989 | - | - | - | - | - | - | Detail |
| CX9g057399 | 9:11,879,413-11,886,780 | - | C1H9g30997 | C2H9g12185 | LOC_Os09g23070 | Os09g0394100 | - | Detail |
| CX9g057598 | 9:11,888,143-11,896,407 | - | C1H9g09905 | C2H9g23876 | LOC_Os09g23084 | Os09g0394300 | - | Detail |
| CX9g057002 | 9:11,924,002-11,928,244 | + | C1H9g21012 | C2H9g25736 | LOC_Os09g23110 | Os09g0394500 | OspGlcT3 | Detail |
| CX9g057018 | 9:11,934,518-11,936,751 | - | C1H9g11161 | C2H9g21887 | LOC_Os09g23140 | Os09g0394600 | - | Detail |
| CX9g056382 | 9:11,941,482-11,945,505 | - | C1H9g04354 | C2H9g21887 | LOC_Os09g23150 | Os09g0394700 | - | Detail |
| CX9g056041 | 9:11,951,732-11,956,267 | + | C1H9g07311 | C2H9g12341 | LOC_Os09g23160 | Os09g0394900 | - | Detail |
| CX9g057525 | 9:12,011,224-12,016,975 | + | C1H9g00378 | C2H9g06605 | LOC_Os09g23200 | Os09g0395300 | RL9, rl9, OsADD1 | Detail |
| CX9g056960 | 9:12,033,094-12,034,500 | - | C1H9g06586 | C2H9g01641 | LOC_Os09g23220 | Os09g0395600 | - | Detail |
| CX9g056289 | 9:12,047,087-12,048,607 | + | C1H9g04135 | C2H9g28359 | LOC_Os09g23280 | Os09g0396300 | - | Detail |
| CX9g057914 | 9:12,052,995-12,053,297 | - | C1H9g21323 | - | - | - | - | Detail |
| CX9g058057 | 9:12,071,995-12,072,147 | + | - | - | - | - | - | Detail |
| CX9g055871 | 9:12,075,617-12,076,923 | + | C1H9g25860 | C2H9g19158 | LOC_Os09g23300 | Os09g0396900 | OsVIT2 | Detail |
| CX9g056819 | 9:12,102,540-12,102,722 | - | - | - | - | - | - | Detail |
| CX9g056954 | 9:12,111,119-12,114,018 | + | C1H9g07186 | C2H9g25337 | LOC_Os09g23350 | Os09g0397300 | - | Detail |
| CX9g057642 | 9:12,116,352-12,117,989 | - | C1H9g18089 | C2H9g27674 | LOC_Os09g23360 | Os09g0397400 | - | Detail |