| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02942 | 1:30,031,566-30,034,970 | + | C2H1g13385 | CX1g000031 | LOC_Os01g58240 | Os01g0794800 | - | Detail |
| C1H1g25833 | 1:30,032,232-30,036,904 | - | C2H1g21351 | - | - | - | - | Detail |
| C1H1g25653 | 1:30,039,800-30,047,154 | + | C2H1g29117 | CX1g000031 | LOC_Os01g58240 | Os01g0795000 | RSP1 | Detail |
| C1H1g21214 | 1:30,049,868-30,054,395 | + | C2H1g27055 | CX1g000031 | LOC_Os01g58270 | Os01g0795100 | - | Detail |
| C1H1g12866 | 1:30,057,062-30,057,763 | - | - | - | - | - | - | Detail |
| C1H1g23689 | 1:30,059,471-30,062,823 | + | C2H1g17970 | CX1g000031 | LOC_Os01g58280 | Os01g0795200 | - | Detail |
| C1H1g13842 | 1:30,066,199-30,070,778 | + | C2H1g21575 | CX1g000031 | LOC_Os01g58290 | Os01g0795400 | Hwi2 | Detail |
| C1H1g19856 | 1:30,072,039-30,072,287 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795600 | - | Detail |
| C1H1g00284 | 1:30,073,389-30,073,613 | + | C2H1g14294 | - | LOC_Os01g58340 | Os01g0795900 | - | Detail |
| C1H1g24727 | 1:30,080,859-30,081,098 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795900 | - | Detail |
| C1H1g15205 | 1:30,092,878-30,095,404 | + | C2H1g23146 | CX1g003893 | LOC_Os01g58380 | Os01g0796400 | - | Detail |
| C1H1g14537 | 1:30,095,888-30,097,988 | - | C2H1g07599 | CX1g005123 | LOC_Os01g58390 | Os01g0796500 | - | Detail |
| C1H1g28486 | 1:30,101,988-30,106,936 | - | C2H1g05560 | CX1g003555 | LOC_Os01g58400 | Os01g0796700 | - | Detail |
| C1H1g15191 | 1:30,109,637-30,110,248 | - | C2H1g00808 | - | - | - | - | Detail |
| C1H1g16633 | 1:30,118,323-30,118,856 | + | - | CX1g006863 | - | - | - | Detail |
| C1H1g08851 | 1:30,124,810-30,125,520 | + | C2H1g04740 | CX1g004754 | LOC_Os01g58420 | Os01g0797600 | ERF3, AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2 | Detail |
| C1H1g04740 | 1:30,146,507-30,150,478 | + | C2H1g19057 | CX1g002330 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| C1H1g24753 | 1:30,154,872-30,157,273 | - | C2H1g16159 | CX1g001040 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| C1H1g14458 | 1:30,157,504-30,158,697 | + | C2H1g05286 | CX1g005010 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| C1H1g21828 | 1:30,158,951-30,160,834 | - | C2H1g30085 | CX1g006206 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056898 | 9:11,807,759-11,808,127 | - | - | - | - | - | - | Detail |
| CX9g056020 | 9:11,812,802-11,816,824 | + | C1H9g23102 | C2H9g12396 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| CX9g054898 | 9:11,819,159-11,822,416 | + | C1H9g00211 | C2H9g04209 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| CX9g057799 | 9:11,849,884-11,854,901 | + | C1H9g11219 | C2H9g01293 | LOC_Os09g22540 | Os09g0393200 | OsJMJ718 | Detail |
| CX9g058011 | 9:11,867,756-11,867,989 | - | - | - | - | - | - | Detail |
| CX9g057399 | 9:11,879,413-11,886,780 | - | C1H9g30997 | C2H9g12185 | LOC_Os09g23070 | Os09g0394100 | - | Detail |
| CX9g057598 | 9:11,888,143-11,896,407 | - | C1H9g09905 | C2H9g23876 | LOC_Os09g23084 | Os09g0394300 | - | Detail |
| CX9g057002 | 9:11,924,002-11,928,244 | + | C1H9g21012 | C2H9g25736 | LOC_Os09g23110 | Os09g0394500 | OspGlcT3 | Detail |
| CX9g057018 | 9:11,934,518-11,936,751 | - | C1H9g11161 | C2H9g21887 | LOC_Os09g23140 | Os09g0394600 | - | Detail |
| CX9g056382 | 9:11,941,482-11,945,505 | - | C1H9g04354 | C2H9g21887 | LOC_Os09g23150 | Os09g0394700 | - | Detail |
| CX9g056041 | 9:11,951,732-11,956,267 | + | C1H9g07311 | C2H9g12341 | LOC_Os09g23160 | Os09g0394900 | - | Detail |
| CX9g057525 | 9:12,011,224-12,016,975 | + | C1H9g00378 | C2H9g06605 | LOC_Os09g23200 | Os09g0395300 | RL9, rl9, OsADD1 | Detail |
| CX9g056960 | 9:12,033,094-12,034,500 | - | C1H9g06586 | C2H9g01641 | LOC_Os09g23220 | Os09g0395600 | - | Detail |
| CX9g056289 | 9:12,047,087-12,048,607 | + | C1H9g04135 | C2H9g28359 | LOC_Os09g23280 | Os09g0396300 | - | Detail |
| CX9g057914 | 9:12,052,995-12,053,297 | - | C1H9g21323 | - | - | - | - | Detail |
| CX9g058057 | 9:12,071,995-12,072,147 | + | - | - | - | - | - | Detail |
| CX9g055871 | 9:12,075,617-12,076,923 | + | C1H9g25860 | C2H9g19158 | LOC_Os09g23300 | Os09g0396900 | OsVIT2 | Detail |
| CX9g056819 | 9:12,102,540-12,102,722 | - | - | - | - | - | - | Detail |
| CX9g056954 | 9:12,111,119-12,114,018 | + | C1H9g07186 | C2H9g25337 | LOC_Os09g23350 | Os09g0397300 | - | Detail |
| CX9g057642 | 9:12,116,352-12,117,989 | - | C1H9g18089 | C2H9g27674 | LOC_Os09g23360 | Os09g0397400 | - | Detail |