| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19159 | 3:4,560,847-4,564,352 | + | C1H3g27623 | CX3g030601 | LOC_Os03g10190 | Os03g0198400 | - | Detail |
| C2H3g09921 | 3:4,570,322-4,572,644 | + | C1H3g02850 | CX3g031306 | LOC_Os03g10200 | Os03g0198500 | - | Detail |
| C2H3g24222 | 3:4,574,335-4,575,869 | - | C1H3g04729 | CX3g030929 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| C2H3g01513 | 3:4,585,572-4,585,963 | + | C1H3g24941 | - | - | - | - | Detail |
| C2H3g16295 | 3:4,593,765-4,595,784 | - | C1H3g23090 | CX3g026889 | LOC_Os03g10220 | - | - | Detail |
| C2H3g19804 | 3:4,596,596-4,599,606 | - | C1H3g13438 | CX3g026154 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| C2H3g09522 | 3:4,599,798-4,604,196 | + | C1H3g16749 | CX3g028745 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| C2H3g01585 | 3:4,609,414-4,610,589 | + | C1H3g12272 | CX3g029096 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| C2H3g23420 | 3:4,621,273-4,622,353 | - | C1H3g00274 | CX3g031305 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| C2H3g26891 | 3:4,639,608-4,640,847 | + | C1H3g07008 | CX3g025392 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| C2H3g01636 | 3:4,654,885-4,656,386 | + | C1H3g12286 | CX3g029912 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| C2H3g23926 | 3:4,662,597-4,663,344 | + | C1H3g29696 | CX3g028962 | - | - | - | Detail |
| C2H3g07176 | 3:4,664,495-4,666,798 | + | C1H3g13020 | CX3g025427 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| C2H3g17766 | 3:4,666,929-4,671,061 | - | C1H3g29298 | CX3g027963 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| C2H3g08890 | 3:4,673,665-4,676,594 | - | C1H3g01933 | CX3g025362 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| C2H3g09465 | 3:4,677,826-4,680,128 | - | C1H3g30301 | CX3g031231 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| C2H3g19650 | 3:4,683,420-4,685,696 | + | C1H3g28372 | CX3g028366 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| C2H3g21201 | 3:4,686,111-4,690,220 | - | C1H3g07769 | CX3g026809 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| C2H3g08749 | 3:4,690,383-4,692,431 | + | C1H3g03267 | - | LOC_Os03g10410 | Os03g0201200 | - | Detail |
| C2H3g27980 | 3:4,692,955-4,695,336 | + | C1H3g26783 | CX3g027641 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055801 | 9:10,772,565-10,773,702 | + | - | C2H9g13000 | - | Os09g0368250 | - | Detail |
| CX9g056254 | 9:10,792,653-10,793,369 | + | - | - | LOC_Os09g20320 | - | - | Detail |
| CX9g056651 | 9:10,797,745-10,798,845 | + | C1H9g20707 | C2H9g04521 | LOC_Os09g20330 | Os09g0368850 | OsANN10 | Detail |
| CX9g057276 | 9:10,802,628-10,807,348 | + | C1H9g07275 | C2H9g11239 | LOC_Os09g20340 | Os09g0368900 | - | Detail |
| CX9g056201 | 9:10,814,257-10,814,466 | - | - | - | - | - | - | Detail |
| CX9g054847 | 9:10,824,994-10,825,527 | + | C1H9g13671 | - | - | - | - | Detail |
| CX9g057652 | 9:10,825,540-10,826,400 | + | C1H9g13671 | C2H9g15745 | LOC_Os09g20350 | Os09g0369000 | OsDREB6 | Detail |
| CX9g055870 | 9:10,849,394-10,851,235 | + | C1H9g26600 | C2H9g22049 | LOC_Os09g20390 | Os09g0369400 | OsTPP7 | Detail |
| CX9g058083 | 9:10,861,117-10,862,961 | - | C1H9g20254 | C2H9g18178 | LOC_Os09g20400 | Os09g0369500 | - | Detail |
| CX9g054976 | 9:10,878,704-10,879,951 | - | - | - | - | - | - | Detail |
| CX9g057823 | 9:10,883,137-10,887,288 | - | C1H9g05408 | C2H9g15437 | LOC_Os09g20430 | Os09g0370200 | - | Detail |
| CX9g055141 | 9:10,887,920-10,888,357 | - | - | - | LOC_Os09g20440 | Os09g0370300 | OsSDH2-2 | Detail |
| CX9g057287 | 9:10,900,119-10,901,459 | + | - | C2H9g01776 | LOC_Os09g20460 | Os09g0370500 | - | Detail |
| CX9g056822 | 9:10,957,944-10,963,819 | + | C1H9g13255 | C2H9g29737 | LOC_Os09g20550 | Os09g0371700 | - | Detail |
| CX9g058116 | 9:10,965,391-10,968,566 | + | C1H9g24353 | C2H9g20914 | LOC_Os09g20560 | Os09g0371800 | - | Detail |
| CX9g056894 | 9:10,972,685-10,973,035 | - | C1H9g30947 | C2H9g22734 | LOC_Os09g21170 | Os09g0379400 | - | Detail |
| CX9g056699 | 9:10,989,249-10,994,860 | + | C1H9g04374 | C2H9g18955 | LOC_Os09g20590 | Os09g0372400 | - | Detail |
| CX9g055716 | 9:11,001,625-11,001,900 | + | - | - | LOC_Os09g20600 | - | - | Detail |
| CX9g056705 | 9:11,005,067-11,007,059 | + | C1H9g21178 | C2H9g10145 | LOC_Os09g20630 | Os09g0372700 | - | Detail |
| CX9g057006 | 9:11,007,858-11,011,148 | - | C1H9g28427 | C2H9g01317 | LOC_Os09g20640 | Os09g0372800 | - | Detail |