| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19859 | 3:275,286-276,089 | + | C1H3g27934 | CX3g029495 | LOC_Os03g01650 | Os03g0106900 | - | Detail |
| C2H3g20988 | 3:277,919-278,233 | + | C1H3g20839 | - | - | Os03g0106550 | - | Detail |
| C2H3g21802 | 3:280,755-281,558 | + | C1H3g09448 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C2H3g24000 | 3:286,286-287,089 | + | C1H3g09211 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C2H3g29856 | 3:289,474-290,277 | - | C1H3g27934 | CX3g025368 | LOC_Os03g01610 | Os03g0106500 | - | Detail |
| C2H3g18319 | 3:294,137-298,154 | - | C1H3g02983 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C2H3g12781 | 3:299,902-301,883 | + | C1H3g17953 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C2H3g12928 | 3:301,892-306,733 | + | C1H3g31596 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C2H3g02258 | 3:309,231-310,675 | - | C1H3g21747 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C2H3g07101 | 3:317,398-325,316 | + | C1H3g27800 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C2H3g28769 | 3:329,534-336,123 | + | C1H3g21135 | CX3g028047 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| C2H3g30259 | 3:338,145-339,134 | + | C1H3g09738 | CX3g029882 | LOC_Os03g01730 | Os03g0107600 | - | Detail |
| C2H3g13144 | 3:342,381-342,698 | + | C1H3g00509 | CX10g008515 | LOC_Os03g01740 | Os03g0107700 | - | Detail |
| C2H3g20378 | 3:343,714-348,648 | - | C1H3g25096 | CX3g029326 | LOC_Os03g01750 | Os03g0107800 | - | Detail |
| C2H3g26807 | 3:351,610-353,831 | + | C1H3g17188 | CX3g028603 | LOC_Os03g01760 | Os03g0107900 | - | Detail |
| C2H3g26003 | 3:355,485-356,808 | - | C1H3g00848 | CX3g030389 | LOC_Os03g01770 | Os03g0108000 | ACR2.2, CDC25.2, OsACR2.2, OsStr21, STR21 | Detail |
| C2H3g13800 | 3:357,667-358,714 | + | C1H3g19790 | CX3g028464 | LOC_Os03g01780 | Os03g0108200 | - | Detail |
| C2H3g05829 | 3:359,984-364,409 | + | C1H3g19790 | CX3g028464 | LOC_Os03g01790 | Os03g0108200 | - | Detail |
| C2H3g04954 | 3:364,453-365,755 | - | C1H3g27345 | CX3g028491 | LOC_Os03g01800 | Os03g0108300 | OsXTH19 | Detail |
| C2H3g18698 | 3:369,393-370,937 | + | C1H3g11796 | CX3g027775 | LOC_Os03g01810 | Os03g0108400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g058013 | 9:10,424,040-10,428,480 | + | C1H9g24707 | C2H9g01285 | LOC_Os09g19640 | Os09g0360400 | - | Detail |
| CX9g057781 | 9:10,432,741-10,437,808 | - | C1H9g09415 | C2H9g17296 | LOC_Os09g19650 | Os09g0360500 | - | Detail |
| CX9g055244 | 9:10,466,255-10,471,427 | + | C1H9g29707 | C2H9g09565 | - | Os09g0360900 | - | Detail |
| CX9g058136 | 9:10,477,025-10,480,734 | + | C1H9g13622 | C2H9g29499 | LOC_Os09g19700 | Os09g0361100 | - | Detail |
| CX9g055323 | 9:10,483,976-10,485,502 | + | C1H9g25278 | C2H9g13448 | LOC_Os09g19710 | Os09g0361200 | - | Detail |
| CX9g057802 | 9:10,486,252-10,487,098 | - | C1H9g16188 | C2H9g29257 | - | Os09g0361300 | - | Detail |
| CX9g055079 | 9:10,492,096-10,495,732 | + | C1H9g24586 | C2H9g12715 | LOC_Os09g19734 | Os09g0361400 | - | Detail |
| CX9g055761 | 9:10,497,288-10,500,453 | + | C1H9g24586 | C2H9g23159 | - | Os09g0361500 | OsICS | Detail |
| CX9g056164 | 9:10,502,868-10,503,026 | + | - | - | - | - | - | Detail |
| CX9g056391 | 9:10,506,365-10,509,920 | - | C1H9g29767 | C2H9g18681 | LOC_Os09g19750 | Os09g0361700 | - | Detail |
| CX9g056718 | 9:10,510,658-10,514,186 | + | C1H9g06183 | C2H9g01617 | - | - | - | Detail |
| CX9g055511 | 9:10,526,305-10,533,600 | + | C1H9g31894 | C2H9g11040 | LOC_Os09g19790 | Os09g0362500 | - | Detail |
| CX9g056749 | 9:10,535,671-10,544,253 | + | C1H9g01637 | C2H9g14092 | LOC_Os09g19800 | Os09g0362500 | - | Detail |
| CX9g057137 | 9:10,547,570-10,552,343 | + | C1H9g29598 | C2H9g06733 | LOC_Os09g19830 | Os09g0362900 | - | Detail |
| CX9g055594 | 9:10,559,054-10,563,131 | + | C1H9g06456 | C2H9g18853 | LOC_Os09g19850 | Os09g0363100 | AL2 | Detail |
| CX9g054946 | 9:10,563,748-10,569,191 | + | C1H9g17470 | C2H9g21274 | LOC_Os09g19880 | Os09g0363400 | - | Detail |
| CX9g055913 | 9:10,573,655-10,575,810 | + | C1H9g09576 | C2H9g19173 | LOC_Os09g19890 | Os09g0363500 | - | Detail |
| CX9g056843 | 9:10,577,343-10,581,229 | - | C1H9g19156 | C2H9g30170 | LOC_Os09g19900 | Os09g0363600 | - | Detail |
| CX9g056665 | 9:10,582,493-10,583,831 | - | C1H9g05940 | C2H9g24242 | LOC_Os09g19910 | Os09g0363700 | - | Detail |
| CX9g057760 | 9:10,585,065-10,588,486 | + | C1H9g13676 | C2H9g24130 | LOC_Os09g19920 | Os09g0363800 | - | Detail |