| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21930 | 3:32,150,556-32,154,996 | + | C1H3g04060 | CX3g029514 | LOC_Os03g62200 | Os03g0838400 | - | Detail |
| C2H3g30547 | 3:32,154,179-32,155,651 | - | C1H3g30110 | - | - | - | - | Detail |
| C2H3g29109 | 3:32,155,144-32,155,530 | + | C1H3g03475 | CX3g029120 | LOC_Os03g62210 | Os03g0838500 | - | Detail |
| C2H3g14459 | 3:32,163,817-32,165,237 | - | C1H3g08024 | CX3g028242 | LOC_Os03g62240 | Os03g0838900 | - | Detail |
| C2H3g18580 | 3:32,166,727-32,169,276 | - | C1H3g14166 | CX3g026663 | LOC_Os03g62250 | Os03g0839000 | - | Detail |
| C2H3g04219 | 3:32,170,446-32,174,439 | - | C1H3g19313 | CX3g026956 | LOC_Os03g62260 | Os03g0839100 | - | Detail |
| C2H3g25899 | 3:32,181,533-32,185,188 | + | C1H3g09907 | CX3g025647 | LOC_Os03g62270 | Os03g0839200 | SMG4 | Detail |
| C2H3g29754 | 3:32,199,447-32,199,857 | - | C1H3g11170 | CX3g026655 | LOC_Os03g62330 | Os03g0839800 | - | Detail |
| C2H3g16491 | 3:32,205,796-32,210,390 | - | C1H3g19828 | CX3g027925 | LOC_Os03g62340 | Os03g0839900 | - | Detail |
| C2H3g23134 | 3:32,225,617-32,234,890 | - | C1H3g10496 | CX3g027463 | LOC_Os03g62388 | Os03g0840500 | - | Detail |
| C2H3g17763 | 3:32,236,269-32,239,656 | - | C1H3g17885 | CX3g031342 | LOC_Os03g62400 | Os03g0627100 | - | Detail |
| C2H3g05770 | 3:32,240,626-32,245,153 | - | C1H3g03752 | CX3g030069 | LOC_Os03g62410 | Os03g0840800 | - | Detail |
| C2H3g27419 | 3:32,246,352-32,249,035 | - | C1H3g30697 | CX3g028979 | LOC_Os03g62420 | Os03g0840900 | DVB1 | Detail |
| C2H3g06584 | 3:32,250,917-32,255,271 | - | C1H3g04157 | CX3g025236 | LOC_Os03g62430 | Os03g0841100 | - | Detail |
| C2H3g20263 | 3:32,261,597-32,263,501 | - | C1H3g25165 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C2H3g22865 | 3:32,264,375-32,270,473 | - | C1H3g04020 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C2H3g23885 | 3:32,271,472-32,276,749 | - | C1H3g13920 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C2H3g18445 | 3:32,292,035-32,295,016 | + | C1H3g00003 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C2H3g22112 | 3:32,296,303-32,298,057 | - | C1H3g05358 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C2H3g14550 | 3:32,300,122-32,301,481 | - | C1H3g18020 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006106 | 1:30,026,995-30,027,821 | - | C1H1g03944 | C2H1g26817 | LOC_Os01g58220 | Os01g0794500 | - | Detail |
| CX1g002581 | 1:30,029,652-30,030,248 | - | - | - | - | - | - | Detail |
| CX1g005064 | 1:30,090,412-30,091,689 | - | - | - | - | - | - | Detail |
| CX1g003893 | 1:30,093,071-30,095,205 | + | C1H1g15205 | C2H1g23146 | LOC_Os01g58380 | Os01g0796400 | - | Detail |
| CX1g005123 | 1:30,096,002-30,098,102 | - | C1H1g14537 | C2H1g07599 | LOC_Os01g58390 | Os01g0796500 | - | Detail |
| CX1g003555 | 1:30,102,366-30,107,050 | - | C1H1g28486 | C2H1g05560 | LOC_Os01g58400 | Os01g0796700 | - | Detail |
| CX1g006863 | 1:30,118,437-30,118,970 | + | C1H1g16633 | - | - | - | - | Detail |
| CX1g004754 | 1:30,124,924-30,125,634 | + | C1H1g08851 | C2H1g00754 | LOC_Os01g58420 | Os01g0797600 | ERF3, AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2 | Detail |
| CX1g004231 | 1:30,138,315-30,138,485 | + | - | - | - | - | - | Detail |
| CX1g002330 | 1:30,146,712-30,148,843 | + | C1H1g04740 | C2H1g19057 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| CX1g005709 | 1:30,149,611-30,150,303 | + | - | - | - | - | - | Detail |
| CX1g001040 | 1:30,155,183-30,157,340 | - | C1H1g24753 | C2H1g16159 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| CX1g005010 | 1:30,157,618-30,158,811 | + | C1H1g14458 | C2H1g05286 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| CX1g006206 | 1:30,159,065-30,160,948 | - | C1H1g21828 | C2H1g30085 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| CX1g005130 | 1:30,184,917-30,187,467 | + | C1H1g12245 | C2H1g18359 | LOC_Os01g58550 | Os01g0799500 | - | Detail |
| CX1g003095 | 1:30,188,062-30,188,256 | + | - | - | - | - | - | Detail |
| CX1g005215 | 1:30,192,951-30,195,420 | + | C1H1g29611 | C2H1g18714 | LOC_Os01g58580 | Os01g0799900 | OsMC6 | Detail |
| CX1g002130 | 1:30,197,257-30,198,673 | - | - | C2H1g06172 | LOC_Os01g58590 | Os01g0800000 | - | Detail |
| CX1g002563 | 1:30,199,055-30,199,264 | - | C1H1g12745 | C2H1g09595 | LOC_Os01g58600 | Os01g0800101 | - | Detail |
| CX1g007223 | 1:30,204,196-30,206,729 | + | C1H1g13802 | C2H1g03442 | LOC_Os01g58610 | Os01g0800266 | - | Detail |