| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17328 | 2:27,610,480-27,615,091 | + | C1H2g28597 | CX2g020919 | LOC_Os02g49080 | Os02g0722700 | - | Detail |
| C2H2g17496 | 2:27,616,244-27,625,481 | - | C1H2g02362 | CX2g020883 | LOC_Os02g49090 | Os02g0722800 | - | Detail |
| C2H2g08939 | 2:27,628,236-27,631,213 | + | - | CX2g023089 | LOC_Os02g49140 | Os02g0723200 | - | Detail |
| C2H2g15860 | 2:27,631,743-27,636,382 | - | C1H2g24734 | CX2g024558 | LOC_Os02g49150 | Os02g0723300 | - | Detail |
| C2H2g04081 | 2:27,641,747-27,641,998 | + | C1H2g24233 | CX2g024533 | LOC_Os02g49160 | Os02g0723400 | - | Detail |
| C2H2g20481 | 2:27,642,336-27,643,024 | + | C1H2g18213 | CX2g024766 | LOC_Os02g49160 | Os02g0817600 | - | Detail |
| C2H2g22851 | 2:27,644,289-27,648,537 | - | C1H2g16175 | CX2g020430 | LOC_Os02g49180 | Os02g0723600 | - | Detail |
| C2H2g17164 | 2:27,648,940-27,651,217 | + | C1H2g00870 | CX2g020353 | LOC_Os02g49190 | Os02g0723700 | - | Detail |
| C2H2g00357 | 2:27,665,234-27,670,033 | + | C1H2g20021 | CX2g023328 | LOC_Os02g49230 | Os02g0724000 | DTH2, OsCCT08, OsBBX7, OsN | Detail |
| C2H2g07003 | 2:27,670,600-27,671,400 | - | - | CX2g024388 | LOC_Os02g49240 | Os02g0724100 | - | Detail |
| C2H2g21182 | 2:27,672,436-27,673,122 | - | C1H2g27016 | CX2g021926 | LOC_Os02g49250 | Os02g0724100 | - | Detail |
| C2H2g14057 | 2:27,674,403-27,678,393 | + | C1H2g09863 | CX2g021258 | LOC_Os02g49260 | Os02g0724500 | - | Detail |
| C2H2g00624 | 2:27,679,210-27,684,362 | + | C1H2g24655 | CX2g020735 | LOC_Os02g49270 | Os02g0724600 | - | Detail |
| C2H2g05357 | 2:27,693,883-27,697,271 | + | C1H2g20212 | CX2g024361 | LOC_Os02g49310 | Os02g0725000 | OsAGC6 | Detail |
| C2H2g11959 | 2:27,700,469-27,704,205 | - | C1H2g12743 | CX2g021752 | LOC_Os02g49320 | Os02g0725100 | - | Detail |
| C2H2g08115 | 2:27,705,000-27,709,427 | + | C1H2g25813 | CX2g019231 | LOC_Os02g49326 | Os02g0725200 | - | Detail |
| C2H2g27630 | 2:27,709,540-27,713,003 | + | C1H2g14119 | CX2g023038 | LOC_Os02g49332 | Os02g0725300 | - | Detail |
| C2H2g22284 | 2:27,716,276-27,717,187 | - | C1H2g16618 | CX2g023830 | LOC_Os02g49350 | Os02g0725500 | - | Detail |
| C2H2g23242 | 2:27,717,816-27,720,074 | + | C1H2g28453 | CX2g023625 | LOC_Os02g49360 | Os02g0725600 | - | Detail |
| C2H2g29436 | 2:27,722,813-27,723,604 | - | C1H2g10199 | CX2g021819 | LOC_Os02g49370 | Os02g0725700 | OsLEC1, OsLEC1/OsHAP3E, OsHAP3E | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003560 | 1:2,613,847-2,618,909 | - | C1H1g18412 | C2H1g28220 | LOC_Os01g06550 | Os01g0158900 | - | Detail |
| CX1g003324 | 1:2,620,064-2,620,959 | - | C1H1g02740 | C2H1g07454 | LOC_Os01g06560 | Os01g0159000 | OsDOG1L-1 | Detail |
| CX1g002516 | 1:2,624,600-2,625,409 | - | - | C2H1g05303 | LOC_Os01g06580 | Os01g0159200 | - | Detail |
| CX1g003405 | 1:2,627,518-2,629,751 | - | C1H1g02418 | C2H1g08729 | LOC_Os01g06590 | Os01g0159300 | - | Detail |
| CX1g003155 | 1:2,635,912-2,641,422 | - | C1H1g01252 | C2H1g06991 | LOC_Os01g06600 | Os01g0159400 | - | Detail |
| CX1g003151 | 1:2,641,883-2,642,433 | + | - | - | - | - | - | Detail |
| CX1g001170 | 1:2,649,218-2,649,601 | - | C1H1g21645 | C2H1g28217 | LOC_Os01g06630 | Os01g0159600 | OsLEA1a | Detail |
| CX1g001891 | 1:2,653,605-2,654,794 | + | C1H1g22893 | C2H1g08769 | LOC_Os01g13460 | Os01g0159800 | OsbHLH035 | Detail |
| CX1g004847 | 1:2,656,917-2,660,017 | - | C1H1g13369 | C2H1g08402 | LOC_Os01g06660 | Os01g0160100 | - | Detail |
| CX1g003449 | 1:2,793,120-2,793,305 | - | - | - | - | - | - | Detail |
| CX1g002812 | 1:2,829,670-2,831,030 | - | C1H1g12656 | C2H1g17955 | LOC_Os01g09010 | - | - | Detail |
| CX1g001881 | 1:2,831,650-2,835,916 | + | C1H1g24044 | C2H1g01310 | LOC_Os01g07070 | Os01g0164400 | - | Detail |
| CX1g000968 | 1:2,837,666-2,840,940 | - | C1H1g01954 | C2H1g17499 | LOC_Os01g07080 | Os01g0164500 | - | Detail |
| CX1g003856 | 1:2,841,412-2,844,042 | - | C1H1g15703 | C2H1g10134 | LOC_Os01g07090 | Os01g0164600 | - | Detail |
| CX1g006755 | 1:2,844,490-2,850,922 | + | C1H1g09727 | C2H1g02724 | LOC_Os01g07100 | Os01g0164700 | - | Detail |
| CX1g002577 | 1:2,851,538-2,851,813 | - | - | - | - | - | - | Detail |
| CX1g005744 | 1:2,851,871-2,852,104 | + | C1H6g31651 | C2H6g01158 | - | - | - | Detail |
| CX1g006690 | 1:2,855,201-2,864,966 | - | C1H1g24474 | C2H1g08155 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| CX1g005149 | 1:2,865,364-2,868,207 | + | C1H1g28709 | C2H1g23761 | LOC_Os01g07120 | Os01g0165000 | - | Detail |
| CX1g003505 | 1:2,868,672-2,870,627 | - | C1H1g06420 | C2H1g13562 | LOC_Os01g07130 | Os01g0165100 | - | Detail |