| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g12729 | 1:33,028,778-33,029,629 | + | - | - | - | - | - | Detail |
| C2H1g08171 | 1:33,044,588-33,045,229 | + | C1H1g24698 | CX1g006898 | LOC_Os01g64620 | Os01g0866000 | - | Detail |
| C2H1g14468 | 1:33,062,097-33,065,472 | + | C1H1g21443 | CX1g006788 | LOC_Os01g64630 | Os01g0964133 | - | Detail |
| C2H1g26628 | 1:33,067,077-33,070,160 | + | C1H1g24361 | CX1g002061 | LOC_Os01g64650 | Os01g0866300 | - | Detail |
| C2H1g13692 | 1:33,071,806-33,074,738 | + | C1H1g19890 | CX1g002061 | LOC_Os01g64660 | Os01g0866400 | OscFBP1, MOC2 | Detail |
| C2H1g27654 | 1:33,074,943-33,076,275 | - | C1H1g06687 | CX1g003440 | LOC_Os01g64670 | Os01g0866500 | - | Detail |
| C2H1g02604 | 1:33,078,663-33,079,175 | - | C1H1g03251 | CX1g000969 | LOC_Os01g64680 | Os01g0866600 | - | Detail |
| C2H1g04946 | 1:33,079,993-33,081,615 | - | C1H1g20073 | CX1g003378 | LOC_Os01g64690 | Os01g0866700 | - | Detail |
| C2H1g24433 | 1:33,091,512-33,094,832 | + | C1H1g10677 | CX1g004424 | LOC_Os01g64700 | Os01g0866800 | - | Detail |
| C2H1g21915 | 1:33,098,085-33,106,160 | + | C1H1g07172 | CX1g005582 | - | Os01g0867100 | - | Detail |
| C2H1g21118 | 1:33,107,281-33,111,773 | + | C1H1g15015 | CX1g006694 | LOC_Os01g64720 | Os01g0867200 | - | Detail |
| C2H1g11092 | 1:33,112,440-33,115,002 | - | C1H1g09141 | CX1g000691 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| C2H1g28759 | 1:33,119,935-33,129,326 | + | C1H1g05827 | CX1g004395 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| C2H1g15067 | 1:33,130,351-33,132,328 | + | C1H1g05655 | CX1g001594 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| C2H1g28339 | 1:33,134,001-33,137,688 | + | C1H1g18522 | CX1g006145 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| C2H1g30207 | 1:33,137,983-33,141,318 | - | C1H1g30751 | CX1g001130 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| C2H1g00754 | 1:33,143,439-33,145,825 | - | C1H1g06977 | CX1g003660 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| C2H1g16482 | 1:33,166,945-33,171,645 | - | C1H1g15696 | CX1g001548 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| C2H1g13803 | 1:33,175,093-33,185,351 | - | C1H1g06751 | CX1g000694 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| C2H1g17173 | 1:33,205,601-33,211,735 | - | C1H1g21599 | CX1g007144 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003560 | 1:2,613,847-2,618,909 | - | C1H1g18412 | C2H1g28220 | LOC_Os01g06550 | Os01g0158900 | - | Detail |
| CX1g003324 | 1:2,620,064-2,620,959 | - | C1H1g02740 | C2H1g07454 | LOC_Os01g06560 | Os01g0159000 | OsDOG1L-1 | Detail |
| CX1g002516 | 1:2,624,600-2,625,409 | - | - | C2H1g05303 | LOC_Os01g06580 | Os01g0159200 | - | Detail |
| CX1g003405 | 1:2,627,518-2,629,751 | - | C1H1g02418 | C2H1g08729 | LOC_Os01g06590 | Os01g0159300 | - | Detail |
| CX1g003155 | 1:2,635,912-2,641,422 | - | C1H1g01252 | C2H1g06991 | LOC_Os01g06600 | Os01g0159400 | - | Detail |
| CX1g003151 | 1:2,641,883-2,642,433 | + | - | - | - | - | - | Detail |
| CX1g001170 | 1:2,649,218-2,649,601 | - | C1H1g21645 | C2H1g28217 | LOC_Os01g06630 | Os01g0159600 | OsLEA1a | Detail |
| CX1g001891 | 1:2,653,605-2,654,794 | + | C1H1g22893 | C2H1g08769 | LOC_Os01g13460 | Os01g0159800 | OsbHLH035 | Detail |
| CX1g004847 | 1:2,656,917-2,660,017 | - | C1H1g13369 | C2H1g08402 | LOC_Os01g06660 | Os01g0160100 | - | Detail |
| CX1g003449 | 1:2,793,120-2,793,305 | - | - | - | - | - | - | Detail |
| CX1g002812 | 1:2,829,670-2,831,030 | - | C1H1g12656 | C2H1g17955 | LOC_Os01g09010 | - | - | Detail |
| CX1g001881 | 1:2,831,650-2,835,916 | + | C1H1g24044 | C2H1g01310 | LOC_Os01g07070 | Os01g0164400 | - | Detail |
| CX1g000968 | 1:2,837,666-2,840,940 | - | C1H1g01954 | C2H1g17499 | LOC_Os01g07080 | Os01g0164500 | - | Detail |
| CX1g003856 | 1:2,841,412-2,844,042 | - | C1H1g15703 | C2H1g10134 | LOC_Os01g07090 | Os01g0164600 | - | Detail |
| CX1g006755 | 1:2,844,490-2,850,922 | + | C1H1g09727 | C2H1g02724 | LOC_Os01g07100 | Os01g0164700 | - | Detail |
| CX1g002577 | 1:2,851,538-2,851,813 | - | - | - | - | - | - | Detail |
| CX1g005744 | 1:2,851,871-2,852,104 | + | C1H6g31651 | C2H6g01158 | - | - | - | Detail |
| CX1g006690 | 1:2,855,201-2,864,966 | - | C1H1g24474 | C2H1g08155 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| CX1g005149 | 1:2,865,364-2,868,207 | + | C1H1g28709 | C2H1g23761 | LOC_Os01g07120 | Os01g0165000 | - | Detail |
| CX1g003505 | 1:2,868,672-2,870,627 | - | C1H1g06420 | C2H1g13562 | LOC_Os01g07130 | Os01g0165100 | - | Detail |