| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09688 | 3:3,191,401-3,193,017 | - | C1H3g04648 | CX3g027461 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| C2H3g10633 | 3:3,194,261-3,194,461 | + | C1H3g06973 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g26226 | 3:3,194,544-3,196,076 | + | C1H3g26589 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g29541 | 3:3,197,024-3,200,400 | + | C1H3g22339 | CX3g029329 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| C2H3g19913 | 3:3,201,036-3,204,268 | - | C1H3g05071 | CX3g026826 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| C2H3g06080 | 3:3,209,799-3,218,697 | + | C1H3g30733 | CX3g027561 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| C2H3g03131 | 3:3,213,087-3,213,844 | - | C1H3g17744 | CX3g029153 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| C2H3g15611 | 3:3,224,007-3,226,727 | + | C1H3g30713 | CX3g029943 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| C2H3g04475 | 3:3,229,652-3,231,256 | - | C1H3g07573 | CX3g029455 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| C2H3g13284 | 3:3,232,972-3,235,178 | - | C1H3g28123 | CX3g026502 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| C2H3g19051 | 3:3,240,112-3,240,477 | - | C1H3g30140 | CX3g030142 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| C2H3g20350 | 3:3,243,795-3,247,329 | + | C1H3g19291 | CX3g026147 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| C2H3g22587 | 3:3,247,889-3,251,731 | - | C1H3g10171 | CX3g030033 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |
| C2H3g17639 | 3:3,256,533-3,257,090 | - | C1H3g24740 | CX3g029150 | LOC_Os03g07440 | Os03g0170500 | - | Detail |
| C2H3g04350 | 3:3,263,703-3,266,489 | - | C1H3g30202 | CX3g026337 | LOC_Os03g07450 | Os03g0170600 | - | Detail |
| C2H3g02647 | 3:3,273,413-3,274,387 | + | C1H3g13830 | CX3g025444 | LOC_Os03g07470 | Os03g0170800 | - | Detail |
| C2H3g25317 | 3:3,276,597-3,282,402 | - | C1H3g13288 | CX3g025078 | LOC_Os03g07480 | Os03g0170900 | - | Detail |
| C2H3g26574 | 3:3,285,739-3,286,096 | + | - | - | - | Os11g0146950 | - | Detail |
| C2H3g08560 | 3:3,293,380-3,294,041 | - | C1H3g19778 | CX3g027135 | LOC_Os03g07510 | Os03g0171300 | PGL1, ILI6 | Detail |
| C2H3g08984 | 3:3,311,401-3,312,696 | + | C1H3g11183 | CX3g026056 | LOC_Os03g07530 | Os03g0171600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g058032 | 9:9,782,786-9,782,944 | - | - | - | - | - | - | Detail |
| CX9g058086 | 9:9,823,709-9,832,062 | - | C1H9g14547 | C2H9g24613 | LOC_Os09g18020 | Os09g0349700 | - | Detail |
| CX9g054841 | 9:9,845,837-9,852,968 | - | C1H9g30812 | C2H9g25715 | LOC_Os09g18040 | Os09g0349700 | - | Detail |
| CX9g057607 | 9:9,853,465-9,853,785 | + | C1H9g13971 | C2H9g17845 | LOC_Os11g30180 | Os03g0411300 | - | Detail |
| CX9g056962 | 9:9,880,420-9,880,593 | - | - | - | - | - | - | Detail |
| CX9g055660 | 9:9,883,613-9,891,028 | - | C1H9g21112 | C2H9g09080 | LOC_Os09g19380 | Os09g0358000 | - | Detail |
| CX9g056907 | 9:9,920,276-9,935,174 | - | C1H9g19942 | C2H9g07898 | LOC_Os09g18159 | Os09g0350900 | - | Detail |
| CX9g056592 | 9:9,950,961-9,960,733 | - | C1H9g30609 | C2H9g14989 | LOC_Os09g18230 | Os09g0351800 | - | Detail |
| CX9g055868 | 9:9,992,131-9,997,589 | - | C1H9g19942 | C2H9g03446 | LOC_Os09g18260 | Os09g0350900 | - | Detail |
| CX9g055402 | 9:10,013,251-10,017,057 | - | C1H9g01685 | C2H9g28190 | LOC_Os09g18320 | Os09g0352400 | - | Detail |
| CX9g057455 | 9:10,023,594-10,024,748 | + | - | C2H9g00929 | LOC_Os09g18330 | - | - | Detail |
| CX9g056083 | 9:10,026,500-10,027,136 | - | - | C2H9g20351 | - | - | - | Detail |
| CX9g055139 | 9:10,027,169-10,027,414 | + | - | C2H9g03152 | - | - | - | Detail |
| CX9g057843 | 9:10,036,411-10,044,703 | - | C1H9g17851 | C2H9g30412 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| CX9g055425 | 9:10,057,296-10,060,109 | + | C1H9g04955 | C2H9g08214 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| CX9g055968 | 9:10,081,973-10,083,718 | + | C1H9g19178 | C2H9g08714 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| CX9g056896 | 9:10,094,562-10,100,162 | - | C1H9g24256 | C2H9g09770 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| CX9g055384 | 9:10,130,891-10,131,132 | - | - | - | - | - | - | Detail |
| CX9g055165 | 9:10,135,774-10,145,942 | + | C1H9g06855 | C2H9g17839 | LOC_Os09g18620 | Os09g0358000 | - | Detail |
| CX9g057279 | 9:10,150,761-10,158,400 | - | C1H9g17851 | C2H9g01606 | LOC_Os09g19140 | Os09g0356000 | - | Detail |