| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17442 | 2:18,422,524-18,423,238 | - | C1H2g29093 | CX2g019839 | LOC_Os02g32580 | Os02g0527200 | - | Detail |
| C2H2g30266 | 2:18,428,074-18,431,227 | - | C1H2g07585 | CX2g022921 | LOC_Os02g32590 | Os02g0527300 | - | Detail |
| C2H2g23334 | 2:18,450,154-18,456,741 | - | C1H2g23562 | CX2g019234 | LOC_Os02g32610 | Os02g0527600 | OsCTR2 | Detail |
| C2H2g00546 | 2:18,457,858-18,459,252 | - | C1H2g04626 | CX2g022229 | - | Os02g0204700 | - | Detail |
| C2H2g10408 | 2:18,468,267-18,470,474 | - | C1H2g07463 | - | - | - | - | Detail |
| C2H2g01475 | 2:18,475,392-18,479,377 | - | C1H2g27676 | CX2g023161 | LOC_Os02g33720 | Os02g0528000 | - | Detail |
| C2H2g30277 | 2:18,481,189-18,483,386 | - | C1H2g02493 | CX2g019088 | LOC_Os02g32650 | Os02g0528100 | - | Detail |
| C2H2g20323 | 2:18,485,079-18,498,127 | - | C1H2g15691 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C2H2g15285 | 2:18,508,480-18,520,543 | - | C1H2g29366 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C2H2g20296 | 2:18,521,354-18,525,604 | - | C1H2g11870 | CX2g020568 | LOC_Os02g25600 | Os01g0134200 | - | Detail |
| C2H2g10414 | 2:18,537,876-18,542,501 | + | C1H2g00920 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C2H2g18145 | 2:18,544,234-18,545,939 | + | C1H2g24766 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C2H2g17400 | 2:18,555,495-18,556,987 | - | C1H2g22581 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C2H2g26264 | 2:18,558,526-18,562,569 | - | C1H2g07352 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C2H2g27061 | 2:18,573,076-18,574,369 | - | C1H2g17686 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C2H2g20227 | 2:18,576,176-18,580,750 | + | C1H2g28782 | - | - | - | - | Detail |
| C2H2g28791 | 2:18,605,539-18,605,808 | + | C1H2g03635 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C2H2g06644 | 2:18,610,359-18,615,965 | - | C1H2g17644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C2H2g13474 | 2:18,621,434-18,629,042 | + | C1H2g20262 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C2H2g09518 | 2:18,638,699-18,639,867 | - | C1H2g17709 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g058032 | 9:9,782,786-9,782,944 | - | - | - | - | - | - | Detail |
| CX9g058086 | 9:9,823,709-9,832,062 | - | C1H9g14547 | C2H9g24613 | LOC_Os09g18020 | Os09g0349700 | - | Detail |
| CX9g054841 | 9:9,845,837-9,852,968 | - | C1H9g30812 | C2H9g25715 | LOC_Os09g18040 | Os09g0349700 | - | Detail |
| CX9g057607 | 9:9,853,465-9,853,785 | + | C1H9g13971 | C2H9g17845 | LOC_Os11g30180 | Os03g0411300 | - | Detail |
| CX9g056962 | 9:9,880,420-9,880,593 | - | - | - | - | - | - | Detail |
| CX9g055660 | 9:9,883,613-9,891,028 | - | C1H9g21112 | C2H9g09080 | LOC_Os09g19380 | Os09g0358000 | - | Detail |
| CX9g056907 | 9:9,920,276-9,935,174 | - | C1H9g19942 | C2H9g07898 | LOC_Os09g18159 | Os09g0350900 | - | Detail |
| CX9g056592 | 9:9,950,961-9,960,733 | - | C1H9g30609 | C2H9g14989 | LOC_Os09g18230 | Os09g0351800 | - | Detail |
| CX9g055868 | 9:9,992,131-9,997,589 | - | C1H9g19942 | C2H9g03446 | LOC_Os09g18260 | Os09g0350900 | - | Detail |
| CX9g055402 | 9:10,013,251-10,017,057 | - | C1H9g01685 | C2H9g28190 | LOC_Os09g18320 | Os09g0352400 | - | Detail |
| CX9g057455 | 9:10,023,594-10,024,748 | + | - | C2H9g00929 | LOC_Os09g18330 | - | - | Detail |
| CX9g056083 | 9:10,026,500-10,027,136 | - | - | C2H9g20351 | - | - | - | Detail |
| CX9g055139 | 9:10,027,169-10,027,414 | + | - | C2H9g03152 | - | - | - | Detail |
| CX9g057843 | 9:10,036,411-10,044,703 | - | C1H9g17851 | C2H9g30412 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| CX9g055425 | 9:10,057,296-10,060,109 | + | C1H9g04955 | C2H9g08214 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| CX9g055968 | 9:10,081,973-10,083,718 | + | C1H9g19178 | C2H9g08714 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| CX9g056896 | 9:10,094,562-10,100,162 | - | C1H9g24256 | C2H9g09770 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| CX9g055384 | 9:10,130,891-10,131,132 | - | - | - | - | - | - | Detail |
| CX9g055165 | 9:10,135,774-10,145,942 | + | C1H9g06855 | C2H9g17839 | LOC_Os09g18620 | Os09g0358000 | - | Detail |
| CX9g057279 | 9:10,150,761-10,158,400 | - | C1H9g17851 | C2H9g01606 | LOC_Os09g19140 | Os09g0356000 | - | Detail |