| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14413 | 4:7,286,481-7,290,468 | + | C1H4g06358 | CX4g036444 | LOC_Os04g15580 | Os04g0366000 | - | Detail |
| C2H4g27049 | 4:7,321,484-7,322,545 | - | C1H4g14603 | CX4g035385 | LOC_Os04g14340 | Os04g0220501 | - | Detail |
| C2H4g23666 | 4:7,329,569-7,332,067 | + | C1H4g16815 | - | - | - | - | Detail |
| C2H4g03840 | 4:7,335,245-7,335,691 | - | C1H4g12802 | CX4g035733 | LOC_Os04g14360 | Os04g0221000 | - | Detail |
| C2H4g23137 | 4:7,354,616-7,362,154 | - | C1H4g14486 | CX4g035733 | LOC_Os04g14410 | Os04g0221000 | - | Detail |
| C2H4g04277 | 4:7,366,046-7,368,782 | + | C1H4g17568 | - | LOC_Os04g14420 | - | - | Detail |
| C2H4g14084 | 4:7,374,155-7,378,486 | - | C1H4g30087 | CX4g033365 | LOC_Os04g14450 | Os04g0221300 | - | Detail |
| C2H4g04483 | 4:7,378,887-7,379,116 | - | - | - | - | - | - | Detail |
| C2H4g15681 | 4:7,400,720-7,410,837 | - | C1H4g20191 | CX4g036219 | LOC_Os04g14510 | Os04g0221600 | - | Detail |
| C2H4g16880 | 4:7,446,530-7,447,250 | - | C1H4g25587 | CX4g036574 | LOC_Os04g13640 | Os04g0213800 | - | Detail |
| C2H4g16558 | 4:7,447,876-7,453,313 | - | C1H4g27190 | CX4g031595 | LOC_Os04g14570 | Os04g0213800 | - | Detail |
| C2H4g15426 | 4:7,487,110-7,503,524 | - | C1H4g09121 | CX4g033711 | LOC_Os04g14654 | Os04g0223000 | - | Detail |
| C2H4g19689 | 4:7,509,814-7,512,457 | - | C1H4g19080 | CX4g031538 | LOC_Os04g14680 | Os04g0223300 | - | Detail |
| C2H4g12058 | 4:7,514,300-7,520,504 | - | C1H4g25173 | CX4g031401 | LOC_Os04g14690 | Os04g0223500 | - | Detail |
| C2H4g10349 | 4:7,539,965-7,545,169 | - | C1H4g16118 | CX4g035150 | LOC_Os04g14690 | Os04g0223901 | - | Detail |
| C2H4g14405 | 4:7,543,736-7,544,182 | + | - | - | - | Os04g0224000 | - | Detail |
| C2H4g13050 | 4:7,552,178-7,555,311 | - | C1H4g31119 | CX4g032865 | LOC_Os11g41400 | - | - | Detail |
| C2H4g13102 | 4:7,571,830-7,574,721 | - | C1H4g31787 | - | - | - | - | Detail |
| C2H4g12943 | 4:7,580,866-7,585,679 | - | C1H4g10957 | CX4g031570 | LOC_Os04g14760 | Os04g0224600 | - | Detail |
| C2H4g19938 | 4:7,600,145-7,607,074 | - | C1H4g03285 | CX4g035046 | LOC_Os04g14790 | Os04g0224900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057803 | 9:8,340,375-8,354,069 | - | C1H9g16572 | C2H9g21646 | LOC_Os09g15850 | Os09g0328066 | - | Detail |
| CX9g056706 | 9:8,382,139-8,387,961 | + | C1H9g22823 | C2H9g22970 | LOC_Os09g15840 | Os09g0327600 | - | Detail |
| CX9g055535 | 9:8,389,807-8,391,478 | + | C1H9g18380 | C2H9g08782 | LOC_Os09g15835 | Os09g0327550 | - | Detail |
| CX9g057778 | 9:8,392,302-8,394,412 | + | - | C2H9g17523 | LOC_Os09g15830 | Os09g0327500 | - | Detail |
| CX9g054848 | 9:8,395,572-8,398,920 | + | C1H9g29316 | C2H9g12353 | LOC_Os09g15820 | Os09g0327400 | - | Detail |
| CX9g057213 | 9:8,399,762-8,402,426 | - | C1H9g27818 | C2H9g21061 | LOC_Os09g15810 | Os09g0327300 | - | Detail |
| CX9g056557 | 9:8,404,352-8,408,360 | + | C1H9g14037 | C2H9g12558 | LOC_Os09g15800 | Os09g0327200 | - | Detail |
| CX9g057160 | 9:8,410,185-8,412,082 | + | C1H9g27205 | C2H9g09631 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| CX9g055621 | 9:8,413,660-8,414,549 | - | C1H9g31109 | C2H9g08878 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| CX9g055228 | 9:8,418,360-8,419,712 | - | C1H9g09285 | C2H9g24688 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| CX9g055311 | 9:8,428,065-8,435,880 | - | C1H9g24231 | C2H9g25380 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| CX9g055191 | 9:8,453,384-8,456,516 | + | C1H9g01463 | C2H9g13951 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| CX9g056621 | 9:8,460,448-8,462,919 | + | - | C2H9g17262 | - | - | - | Detail |
| CX9g056384 | 9:8,465,800-8,466,870 | - | C1H9g06365 | C2H9g24883 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| CX9g055208 | 9:8,474,859-8,475,108 | + | - | - | - | - | - | Detail |
| CX9g056870 | 9:8,489,952-8,490,191 | - | - | - | - | - | - | Detail |
| CX9g056577 | 9:8,502,963-8,506,792 | - | C1H9g22857 | C2H9g15142 | LOC_Os09g15540 | Os09g0324300 | - | Detail |
| CX9g057572 | 9:8,508,954-8,509,430 | - | - | C2H9g12849 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| CX9g055980 | 9:8,516,644-8,517,725 | + | C1H9g26563 | C2H9g30451 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| CX9g057171 | 9:8,524,467-8,525,538 | - | C1H9g26563 | C2H9g24164 | LOC_Os09g15500 | Os09g0323700 | - | Detail |