| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g07629 | 5:22,064,353-22,067,318 | + | C1H5g10593 | CX5g039260 | LOC_Os05g45410 | Os05g0530400 | OsSPL7, SPL7, HSFA-4d | Detail |
| C2H5g03685 | 5:22,067,847-22,072,276 | - | C1H5g11637 | CX5g040944 | LOC_Os05g45420 | Os05g0530500 | - | Detail |
| C2H5g04972 | 5:22,073,757-22,074,254 | + | - | CX5g038767 | - | - | - | Detail |
| C2H5g21081 | 5:22,078,620-22,080,044 | - | C1H5g15948 | CX5g039408 | LOC_Os05g45430 | Os05g0530701 | - | Detail |
| C2H5g25354 | 5:22,092,044-22,092,487 | + | C1H5g13864 | CX5g038460 | LOC_Os05g45450 | Os05g0531100 | OsS40-1 | Detail |
| C2H5g07402 | 5:22,095,183-22,096,118 | + | C1H5g03559 | CX5g038119 | LOC_Os05g45460 | Os05g0531200 | - | Detail |
| C2H5g17651 | 5:22,102,533-22,103,427 | + | C1H5g22321 | CX5g037192 | LOC_Os05g45480 | Os05g0531400 | - | Detail |
| C2H5g11219 | 5:22,106,953-22,110,969 | + | C1H5g15758 | CX5g038581 | LOC_Os05g45490 | Os05g0531500 | - | Detail |
| C2H5g15734 | 5:22,111,662-22,112,486 | - | C1H5g28033 | CX5g037981 | LOC_Os05g45500 | Os05g0531600 | - | Detail |
| C2H5g12427 | 5:22,113,402-22,114,241 | + | C1H5g08016 | CX5g038393 | - | Os05g0531700 | - | Detail |
| C2H5g24044 | 5:22,120,833-22,122,254 | - | C1H5g04935 | CX5g038750 | LOC_Os05g45570 | Os05g0531800 | - | Detail |
| C2H5g13615 | 5:22,127,448-22,134,174 | + | C1H5g27355 | - | - | - | - | Detail |
| C2H5g02345 | 5:22,136,356-22,138,948 | - | C1H5g04935 | CX5g039224 | LOC_Os05g45570 | Os05g0532300 | - | Detail |
| C2H5g12338 | 5:22,142,104-22,144,335 | - | C1H5g05498 | CX5g040316 | LOC_Os05g45580 | Os05g0532500 | - | Detail |
| C2H5g06712 | 5:22,145,904-22,149,704 | - | C1H5g05803 | CX5g038442 | LOC_Os05g45590 | Os05g0532600 | OsHXK2 | Detail |
| C2H5g30367 | 5:22,150,996-22,151,253 | - | C1H5g22210 | CX5g039722 | LOC_Os05g45610 | Os05g0532800 | - | Detail |
| C2H5g14529 | 5:22,152,080-22,152,452 | + | C1H5g25723 | CX5g037022 | LOC_Os09g33986 | Os09g0515200 | - | Detail |
| C2H5g24963 | 5:22,153,495-22,156,675 | + | C1H5g21932 | CX5g038984 | LOC_Os05g45660 | Os05g0533100 | - | Detail |
| C2H5g26779 | 5:22,157,002-22,161,321 | - | C1H5g22241 | CX5g040305 | LOC_Os05g45670 | Os05g0533200 | - | Detail |
| C2H5g19069 | 5:22,166,219-22,167,019 | - | C1H5g26762 | CX5g037078 | LOC_Os05g45700 | Os05g0533450 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057803 | 9:8,340,375-8,354,069 | - | C1H9g16572 | C2H9g21646 | LOC_Os09g15850 | Os09g0328066 | - | Detail |
| CX9g056706 | 9:8,382,139-8,387,961 | + | C1H9g22823 | C2H9g22970 | LOC_Os09g15840 | Os09g0327600 | - | Detail |
| CX9g055535 | 9:8,389,807-8,391,478 | + | C1H9g18380 | C2H9g08782 | LOC_Os09g15835 | Os09g0327550 | - | Detail |
| CX9g057778 | 9:8,392,302-8,394,412 | + | - | C2H9g17523 | LOC_Os09g15830 | Os09g0327500 | - | Detail |
| CX9g054848 | 9:8,395,572-8,398,920 | + | C1H9g29316 | C2H9g12353 | LOC_Os09g15820 | Os09g0327400 | - | Detail |
| CX9g057213 | 9:8,399,762-8,402,426 | - | C1H9g27818 | C2H9g21061 | LOC_Os09g15810 | Os09g0327300 | - | Detail |
| CX9g056557 | 9:8,404,352-8,408,360 | + | C1H9g14037 | C2H9g12558 | LOC_Os09g15800 | Os09g0327200 | - | Detail |
| CX9g057160 | 9:8,410,185-8,412,082 | + | C1H9g27205 | C2H9g09631 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| CX9g055621 | 9:8,413,660-8,414,549 | - | C1H9g31109 | C2H9g08878 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| CX9g055228 | 9:8,418,360-8,419,712 | - | C1H9g09285 | C2H9g24688 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| CX9g055311 | 9:8,428,065-8,435,880 | - | C1H9g24231 | C2H9g25380 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| CX9g055191 | 9:8,453,384-8,456,516 | + | C1H9g01463 | C2H9g13951 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| CX9g056621 | 9:8,460,448-8,462,919 | + | - | C2H9g17262 | - | - | - | Detail |
| CX9g056384 | 9:8,465,800-8,466,870 | - | C1H9g06365 | C2H9g24883 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| CX9g055208 | 9:8,474,859-8,475,108 | + | - | - | - | - | - | Detail |
| CX9g056870 | 9:8,489,952-8,490,191 | - | - | - | - | - | - | Detail |
| CX9g056577 | 9:8,502,963-8,506,792 | - | C1H9g22857 | C2H9g15142 | LOC_Os09g15540 | Os09g0324300 | - | Detail |
| CX9g057572 | 9:8,508,954-8,509,430 | - | - | C2H9g12849 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| CX9g055980 | 9:8,516,644-8,517,725 | + | C1H9g26563 | C2H9g30451 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| CX9g057171 | 9:8,524,467-8,525,538 | - | C1H9g26563 | C2H9g24164 | LOC_Os09g15500 | Os09g0323700 | - | Detail |